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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
73.4
nTPM
Monaco:
185.2
nTPM
Schmiedel:
69.6
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
73.4
HPA sample
nTPM
gdT-cell nTPM: 69.0
Samples: 6
Max nTPM: 100.0
Min nTPM: 42.5
P10809_1007
46.6
P10809_1022
83.5
P10809_1041
93.9
P10809_1060
42.5
P10809_1077
100.0
P10809_1098
47.6
MAIT T-cell nTPM: 60.9
Samples: 6
Max nTPM: 73.6
Min nTPM: 45.0
P10809_1006
45.0
P10809_1024
73.6
P10809_1043
68.7
P10809_1062
50.9
P10809_1083
66.6
P10809_1097
60.4
Memory CD4 T-cell nTPM: 65.8
Samples: 6
Max nTPM: 91.9
Min nTPM: 54.6
P10809_1014
55.6
P10809_1026
54.6
P10809_1045
64.0
P10809_1064
66.4
P10809_1086
91.9
P10809_1113
62.4
Memory CD8 T-cell nTPM: 66.8
Samples: 5
Max nTPM: 83.2
Min nTPM: 55.4
P10809_1012
55.4
P10809_1027
83.2
P10809_1046
69.5
P10809_1065
61.8
P10809_1111
64.0
Naive CD4 T-cell nTPM: 36.0
Samples: 6
Max nTPM: 58.0
Min nTPM: 24.7
P10809_1015
31.5
P10809_1030
40.6
P10809_1049
29.1
P10809_1068
24.7
P10809_1085
58.0
P10809_1112
32.1
Naive CD8 T-cell nTPM: 49.6
Samples: 6
Max nTPM: 81.6
Min nTPM: 32.2
P10809_1016
32.2
P10809_1031
32.4
P10809_1050
61.4
P10809_1069
54.3
P10809_1087
81.6
P10809_1110
35.9
T-reg nTPM: 73.4
Samples: 6
Max nTPM: 99.8
Min nTPM: 46.9
P10809_1018
46.9
P10809_1037
99.8
P10809_1056
79.3
P10809_1075
77.5
P10809_1094
59.7
P10809_1106
77.3
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
185.2
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 90.3
Samples: 4
Max nTPM: 115.2
Min nTPM: 64.6
RHH5202_R3573
107.0
RHH5230_R3602
74.5
RHH5259_R3631
64.6
RHH5288_R3660
115.2
Effector memory CD8 T-cell nTPM: 185.3
Samples: 4
Max nTPM: 230.1
Min nTPM: 157.3
RHH5203_R3574
157.3
RHH5231_R3603
185.8
RHH5260_R3632
167.8
RHH5289_R3661
230.1
MAIT T-cell nTPM: 112.5
Samples: 4
Max nTPM: 116.1
Min nTPM: 103.0
RHH5233_R3605
115.2
RHH5205_R3576
103.0
RHH5262_R3634
115.6
RHH5297_R3663
116.1
Memory CD4 T-cell TFH nTPM: 107.3
Samples: 4
Max nTPM: 121.7
Min nTPM: 93.5
RHH5300_R3666
101.6
RHH5236_R3608
121.7
RHH5265_R3637
93.5
RHH5208_R3579
112.3
Memory CD4 T-cell Th1 nTPM: 88.5
Samples: 4
Max nTPM: 114.2
Min nTPM: 64.3
RHH5210_R3581
64.3
RHH5302_R3668
111.0
RHH5238_R3610
64.3
RHH5267_R3639
114.2
Memory CD4 T-cell Th1/Th17 nTPM: 105.5
Samples: 4
Max nTPM: 161.6
Min nTPM: 77.4
RHH5303_R3669
161.6
RHH5211_R3582
77.4
RHH5239_R3611
87.6
RHH5268_R3640
95.5
Memory CD4 T-cell Th17 nTPM: 122.1
Samples: 4
Max nTPM: 140.0
Min nTPM: 106.8
RHH5304_R3670
140.0
RHH5212_R3583
106.8
RHH5240_R3612
126.5
RHH5269_R3641
114.9
Memory CD4 T-cell Th2 nTPM: 111.8
Samples: 4
Max nTPM: 132.2
Min nTPM: 92.9
RHH5305_R3671
132.2
RHH5213_R3584
99.9
RHH5241_R3613
92.9
RHH5270_R3642
122.3
Naive CD4 T-cell nTPM: 77.9
Samples: 4
Max nTPM: 86.4
Min nTPM: 69.6
RHH5306_R3672
81.5
RHH5214_R3585
86.4
RHH5242_R3614
74.0
RHH5271_R3643
69.6
Naive CD8 T-cell nTPM: 67.5
Samples: 4
Max nTPM: 84.7
Min nTPM: 51.9
RHH5201_R3572
84.7
RHH5229_R3601
51.9
RHH5258_R3630
58.2
RHH5287_R3659
75.2
Non-Vd2 gdTCR nTPM: 175.1
Samples: 4
Max nTPM: 228.9
Min nTPM: 153.3
RHH5235_R3607
160.6
RHH5264_R3636
228.9
RHH5207_R3578
157.4
RHH5299_R3665
153.3
T-reg nTPM: 88.3
Samples: 4
Max nTPM: 94.6
Min nTPM: 84.3
RHH5301_R3667
94.6
RHH5237_R3609
88.8
RHH5266_R3638
84.3
RHH5209_R3580
85.6
Terminal effector memory CD4 T-cell nTPM: 161.6
Samples: 2
Max nTPM: 167.4
Min nTPM: 155.8
RHH5243_R3615
167.4
RHH5272_R3644
155.8
Terminal effector memory CD8 T-cell nTPM: 183.6
Samples: 4
Max nTPM: 210.9
Min nTPM: 139.7
RHH5232_R3604
210.9
RHH5204_R3575
139.7
RHH5261_R3633
183.1
RHH5296_R3662
200.5
Vd2 gdTCR nTPM: 126.1
Samples: 4
Max nTPM: 163.3
Min nTPM: 82.7
RHH5234_R3606
163.3
RHH5206_R3577
148.7
RHH5263_R3635
109.5
RHH5298_R3664
82.7
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
