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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
326.6
nTPM
GTEx:
326.6
nTPM
FANTOM5:
308.1
Scaled Tags Per Million
Pig:
42.4
nTPM
Mouse:
17.8
nTPM
RETINA - Annotated protein expression
Pending normal tissue analysis
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
326.6
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 326.6
Samples: 105
Max nTPM: 628.1
Min nTPM: 150.5
Std nTPM: 99.5
Median nTPM:
501_1
88 years, male
628.1
491_1
89 years, female
589.5
137_1
83 years, male
537.7
384_1
83 years, male
527.0
119_1
70 years, female
512.6
42_1
85 years, male
512.1
173_1
67 years, male
497.5
89_1
63 years, male
491.3
315_1
62 years, female
490.0
308_1
70 years, female
478.9
490_1
67 years, female
473.3
4_1
88 years, female
473.2
314_1
67 years, male
463.5
145_1
84 years, male
462.9
295_1
61 years, female
459.6
41_1
94 years, female
445.5
506_1
65 years, male
439.5
311_1
78 years, male
429.1
17_1
71 years, male
427.5
375_1
74 years, female
427.2
379_1
60 years, male
424.5
35_1
74 years, female
413.8
414_1
84 years, female
402.1
351_1
91 years, male
398.0
139_1
64 years, female
396.3
288_1
66 years, female
390.6
447_1
81 years, male
384.7
452_1
88 years, female
384.5
347_1
72 years, male
383.6
218_1
71 years, female
383.1
317_1
60 years, male
370.5
518_1
75 years, female
368.8
142_1
61 years, female
366.7
413_1
59 years, female
366.2
120_1
70 years, female
358.7
389_1
86 years, female
354.2
396_1
62 years, male
348.0
264_1
73 years, female
344.9
149_1
88 years, male
344.6
237_1
82 years, male
340.8
394_1
75 years, female
334.6
307_1
66 years, female
333.1
354_1
81 years, female
328.6
189_1
76 years, male
326.5
18_1
88 years, male
325.9
99_1
64 years, male
324.6
495_1
57 years, female
323.6
81_1
67 years, male
323.2
126_1
63 years, male
321.7
109_1
81 years, female
316.6
350_1
84 years, female
316.6
43_1
64 years, female
314.8
353_1
82 years, female
310.9
319_1
81 years, male
310.5
117_1
61 years, male
307.3
254_1
77 years, female
306.0
348_1
84 years, male
294.3
356_1
87 years, female
294.2
386_1
76 years, male
291.6
322_1
76 years, male
284.1
265_1
87 years, male
280.8
313_1
79 years, female
280.0
6_1
73 years, female
279.7
316_1
62 years, male
274.5
246_1
77 years, male
274.0
291_1
76 years, male
273.7
468_1
89 years, male
268.1
415_1
77 years, female
267.9
406_1
79 years, male
267.6
243_1
75 years, male
266.9
318_1
68 years, male
266.6
320_1
89 years, female
266.4
2_1
77 years, female
265.3
503_1
68 years, male
265.1
349_1
83 years, male
258.8
324_1
76 years, male
256.4
162_1
79 years, female
254.7
499_1
55 years, female
252.1
115_1
83 years, male
250.4
526_1
61 years, male
249.8
177_1
74 years, male
249.1
376_1
75 years, female
248.9
466_1
57 years, female
247.4
377_1
82 years, female
247.3
405_1
91 years, male
237.4
163_1
78 years, male
235.4
352_1
62 years, male
232.2
321_1
62 years, female
230.7
480_1
63 years, male
228.9
292_1
71 years, male
225.7
32_1
67 years, male
225.0
217_1
76 years, male
222.9
355_1
70 years, female
222.6
517_1
88 years, male
218.0
172_1
72 years, female
213.2
153_1
70 years, female
212.7
251_1
78 years, male
209.2
266_1
85 years, male
204.6
335_1
73 years, female
197.3
286_1
68 years, female
196.6
9_1
66 years, female
190.9
404_1
82 years, female
187.6
425_1
59 years, female
187.2
229_1
69 years, female
175.0
293_1
68 years, female
150.5
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.