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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
50.7
nTPM
Monaco:
95.9
nTPM
Schmiedel:
82.0
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
50.7
HPA sample
nTPM
gdT-cell nTPM: 18.3
Samples: 6
Max nTPM: 22.6
Min nTPM: 15.3
P10809_1007
15.3
P10809_1022
17.9
P10809_1041
22.6
P10809_1060
18.3
P10809_1077
20.3
P10809_1098
15.5
MAIT T-cell nTPM: 35.4
Samples: 6
Max nTPM: 47.5
Min nTPM: 27.0
P10809_1006
28.0
P10809_1024
47.5
P10809_1043
29.0
P10809_1062
27.0
P10809_1083
38.3
P10809_1097
42.8
Memory CD4 T-cell nTPM: 50.7
Samples: 6
Max nTPM: 64.9
Min nTPM: 31.7
P10809_1014
56.7
P10809_1026
64.9
P10809_1045
55.9
P10809_1064
31.7
P10809_1086
44.7
P10809_1113
50.3
Memory CD8 T-cell nTPM: 29.6
Samples: 5
Max nTPM: 36.5
Min nTPM: 21.9
P10809_1012
28.9
P10809_1027
35.2
P10809_1046
25.4
P10809_1065
21.9
P10809_1111
36.5
Naive CD4 T-cell nTPM: 41.2
Samples: 6
Max nTPM: 48.1
Min nTPM: 30.6
P10809_1015
44.2
P10809_1030
44.7
P10809_1049
40.6
P10809_1068
38.8
P10809_1085
48.1
P10809_1112
30.6
Naive CD8 T-cell nTPM: 26.1
Samples: 6
Max nTPM: 34.7
Min nTPM: 18.3
P10809_1016
31.2
P10809_1031
34.7
P10809_1050
24.5
P10809_1069
23.9
P10809_1087
18.3
P10809_1110
23.9
T-reg nTPM: 30.6
Samples: 6
Max nTPM: 47.8
Min nTPM: 20.4
P10809_1018
21.0
P10809_1037
43.9
P10809_1056
47.8
P10809_1075
20.4
P10809_1094
23.5
P10809_1106
26.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
95.9
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 48.9
Samples: 4
Max nTPM: 74.7
Min nTPM: 27.9
RHH5202_R3573
45.8
RHH5230_R3602
47.3
RHH5259_R3631
27.9
RHH5288_R3660
74.7
Effector memory CD8 T-cell nTPM: 26.1
Samples: 4
Max nTPM: 34.3
Min nTPM: 16.7
RHH5203_R3574
32.6
RHH5231_R3603
34.3
RHH5260_R3632
16.7
RHH5289_R3661
20.6
MAIT T-cell nTPM: 39.9
Samples: 4
Max nTPM: 47.1
Min nTPM: 26.0
RHH5233_R3605
45.0
RHH5205_R3576
26.0
RHH5262_R3634
41.3
RHH5297_R3663
47.1
Memory CD4 T-cell TFH nTPM: 75.1
Samples: 4
Max nTPM: 99.8
Min nTPM: 56.8
RHH5300_R3666
68.7
RHH5236_R3608
99.8
RHH5265_R3637
56.8
RHH5208_R3579
75.1
Memory CD4 T-cell Th1 nTPM: 58.6
Samples: 4
Max nTPM: 74.6
Min nTPM: 45.2
RHH5210_R3581
74.6
RHH5302_R3668
67.6
RHH5238_R3610
45.2
RHH5267_R3639
46.8
Memory CD4 T-cell Th1/Th17 nTPM: 67.2
Samples: 4
Max nTPM: 103.8
Min nTPM: 41.7
RHH5303_R3669
65.3
RHH5211_R3582
103.8
RHH5239_R3611
41.7
RHH5268_R3640
58.1
Memory CD4 T-cell Th17 nTPM: 70.6
Samples: 4
Max nTPM: 104.3
Min nTPM: 48.4
RHH5304_R3670
69.9
RHH5212_R3583
104.3
RHH5240_R3612
59.7
RHH5269_R3641
48.4
Memory CD4 T-cell Th2 nTPM: 95.9
Samples: 4
Max nTPM: 132.5
Min nTPM: 64.7
RHH5305_R3671
82.8
RHH5213_R3584
103.7
RHH5241_R3613
132.5
RHH5270_R3642
64.7
Naive CD4 T-cell nTPM: 57.8
Samples: 4
Max nTPM: 70.1
Min nTPM: 35.7
RHH5306_R3672
57.3
RHH5214_R3585
68.1
RHH5242_R3614
70.1
RHH5271_R3643
35.7
Naive CD8 T-cell nTPM: 47.4
Samples: 4
Max nTPM: 65.5
Min nTPM: 34.7
RHH5201_R3572
43.7
RHH5229_R3601
34.7
RHH5258_R3630
65.5
RHH5287_R3659
45.5
Non-Vd2 gdTCR nTPM: 25.0
Samples: 4
Max nTPM: 33.1
Min nTPM: 18.7
RHH5235_R3607
18.7
RHH5264_R3636
24.3
RHH5207_R3578
33.1
RHH5299_R3665
23.9
T-reg nTPM: 65.8
Samples: 4
Max nTPM: 95.9
Min nTPM: 42.7
RHH5301_R3667
66.1
RHH5237_R3609
95.9
RHH5266_R3638
42.7
RHH5209_R3580
58.4
Terminal effector memory CD4 T-cell nTPM: 23.3
Samples: 2
Max nTPM: 28.6
Min nTPM: 18.0
RHH5243_R3615
18.0
RHH5272_R3644
28.6
Terminal effector memory CD8 T-cell nTPM: 28.1
Samples: 4
Max nTPM: 33.9
Min nTPM: 23.6
RHH5232_R3604
28.6
RHH5204_R3575
33.9
RHH5261_R3633
23.6
RHH5296_R3662
26.2
Vd2 gdTCR nTPM: 34.7
Samples: 4
Max nTPM: 45.6
Min nTPM: 26.2
RHH5234_R3606
34.5
RHH5206_R3577
45.6
RHH5263_R3635
26.2
RHH5298_R3664
32.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
