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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
190.2
nTPM
FANTOM5:
24.1
Scaled Tags Per Million
Pig:
169.4
nTPM
PONS - HPA Brain RNA-seq
Max nTPM
190.2
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 190.2
2090
Male, age 80, both hemispheres
204.2
2188
Female, age 91, both hemispheres
201.4
1984
Male, age 76, both hemispheres
178.9
2301
Female, age 85, both hemispheres
176.1
Dorsal cochlear nucleus nTPM: 173.0
2378
Male, age 80, both hemispheres
199.6
2187
Female, age 91, both hemispheres
183.8
2058
Male, age 76, both hemispheres
170.0
2802
Male, age 74, right hemisphere
157.9
2370
Male, age 61, both hemispheres
153.8
Dorsal tegmental nucleus nTPM: 173.3
2326
Male, age 74, both hemispheres
204.5
1936
Male, age 76, left hemisphere
187.4
2358
Male, age 61, both hemispheres
157.0
2083
Male, age 80, both hemispheres
144.3
Dorsolateral tegmental area nTPM: 188.3
2337
Male, age 61, both hemispheres
228.9
2751
Female, age 85, both hemispheres
207.9
2360
Male, age 74, both hemispheres
195.2
2654
Male, age 80, both hemispheres
168.6
2141
Male, age 76, both hemispheres
141.0
Kolliker-Fuse nucleus nTPM: 175.0
2315
Male, age 76, right hemisphere
210.2
2793
Female, age 91, left hemisphere
164.6
2163
Male, age 80, both hemispheres
150.3
Lateral lemniscal nuclei nTPM: 144.4
2746
Female, age 85, left hemisphere
165.8
2320
Female, age 91, left hemisphere
158.2
2453
Male, age 74, right hemisphere
138.2
2169
Male, age 76, both hemispheres
136.3
2036
Male, age 80, both hemispheres
123.4
Lateral parabrachial nucleus nTPM: 187.2
2792
Male, age 76, both hemispheres
271.1
2013
Male, age 80, both hemispheres
191.7
2790
Male, age 61, both hemispheres
156.3
2139
Female, age 85, right hemisphere
129.8
Lateral vestibular nucleus nTPM: 161.3
2311
Male, age 80, both hemispheres
186.2
2184
Male, age 76, both hemispheres
136.4
Locus coeruleus nTPM: 124.7
2317
Female, age 72, unknown
147.1
2162
Male, age 80, both hemispheres
141.1
1980
Male, age 76, both hemispheres
124.7
2014
Male, age 55, unknown
124.0
2123
Female, age 91, both hemispheres
117.3
2788
Male, age 74, unknown
109.6
2720
Male, age 74, both hemispheres
108.8
Medial parabrachial nucleus nTPM: 167.9
2170
Female, age 91, both hemispheres
184.1
2463
Female, age 85, right hemisphere
175.0
2854
Male, age 80, both hemispheres
163.8
2156
Male, age 61, both hemispheres
159.8
2786
Male, age 76, both hemispheres
156.9
Medial periolivary nuclei nTPM: 163.9
2791
Male, age 74, right hemisphere
220.3
2081
Male, age 80, both hemispheres
183.6
2063
Male, age 76, both hemispheres
157.3
2458
Female, age 91, both hemispheres
145.8
2171
Female, age 85, both hemispheres
112.7
Motor facial nucleus nTPM: 154.5
2365
Male, age 74, right hemisphere
195.1
2126
Male, age 61, both hemispheres
176.6
2795
Female, age 91, both hemispheres
149.3
2062
Male, age 76, both hemispheres
147.8
2697
Female, age 85, both hemispheres
138.6
2327
Male, age 80, both hemispheres
119.8
Motor trigeminal nucleus nTPM: 148.4
2560
Male, age 74, both hemispheres
158.0
2309
Male, age 76, both hemispheres
148.0
2079
Male, age 80, both hemispheres
147.8
2321
Female, age 91, both hemispheres
145.9
2335
Male, age 61, both hemispheres
142.5
Nuclei of the trapezoid body nTPM: 145.2
1983
Male, age 76, both hemispheres
174.5
2166
Male, age 80, both hemispheres
150.9
2368
Female, age 91, both hemispheres
147.9
2159
Male, age 61, both hemispheres
127.0
2735
Female, age 85, both hemispheres
125.5
Nucleus raphe magnus nTPM: 141.9
2051
Male, age 76, both hemispheres
172.7
2455
Male, age 74, both hemispheres
167.2
2459
Female, age 91, both hemispheres
155.2
2328
Male, age 80, both hemispheres
144.1
2160
Male, age 61, both hemispheres
112.0
2172
Female, age 85, both hemispheres
100.0
Paramedian reticular nucleus nTPM: 148.8
2057
Male, age 80, both hemispheres
155.7
2313
Male, age 61, both hemispheres
147.8
2052
Male, age 76, both hemispheres
146.2
2050
Female, age 85, both hemispheres
145.6
Pedunculopontine tegmental nucleus nTPM: 183.3
2338
Male, age 61, both hemispheres
204.0
2334
Male, age 80, both hemispheres
175.1
1921
Female, age 85, both hemispheres
170.7
Pontine nuclei nTPM: 165.5
2454
Male, age 74, left hemisphere
222.9
2319
Female, age 91, both hemispheres
200.7
2109
Female, age 72, unknown
175.5
1863
Male, age 55, unknown
165.1
1968
Male, age 76, left hemisphere
162.8
2115
Male, age 80, left hemisphere
148.1
2727
Male, age 61, right hemisphere
141.3
2787
Female, age 85, both hemispheres
107.6
Pontine raphe nucleus nTPM: 146.6
2853
Male, age 76, midline
151.4
2122
Female, age 85, midline
141.8
Posteroventral cochlear nucleus nTPM: 190.0
2341
Male, age 80, both hemispheres
227.5
2135
Female, age 91, both hemispheres
223.5
2371
Male, age 61, both hemispheres
177.7
2070
Male, age 76, both hemispheres
171.9
2752
Female, age 85, both hemispheres
149.5
Principal sensory trigeminal nucleus nTPM: 143.7
2367
Female, age 91, left hemisphere
178.3
2324
Male, age 76, both hemispheres
149.9
2008
Male, age 80, left hemisphere
137.9
2158
Male, age 61, both hemispheres
108.9
Reticular pontine nucleus, caudal nTPM: 160.3
2457
Female, age 91, both hemispheres
180.4
2092
Male, age 76, both hemispheres
175.4
2559
Male, age 74, both hemispheres
168.0
2332
Male, age 80, right hemisphere
117.1
Reticular pontine nucleus, oral nTPM: 168.2
2366
Female, age 91, both hemispheres
181.8
1939
Male, age 80, both hemispheres
178.1
2012
Female, age 85, both hemispheres
162.5
2167
Male, age 76, both hemispheres
159.5
2361
Male, age 74, both hemispheres
159.2
Reticulotegmental nucleus nTPM: 150.0
2322
Female, age 91, both hemispheres
163.8
2333
Male, age 80, both hemispheres
163.6
2452
Male, age 74, both hemispheres
147.8
2325
Male, age 76, both hemispheres
124.9
Spinal trigeminal nucleus, oral nTPM: 160.1
1978
Male, age 76, both hemispheres
171.4
2164
Male, age 80, both hemispheres
157.7
2737
Female, age 85, both hemispheres
151.0
Subcoeruleus area nTPM: 167.3
2369
Female, age 85, left hemisphere
228.7
2089
Male, age 76, left hemisphere
154.8
2323
Female, age 91, left hemisphere
151.5
1958
Male, age 80, both hemispheres
151.1
2451
Male, age 74, both hemispheres
150.5
Superior olive nTPM: 163.7
2364
Male, age 74, right hemisphere
225.7
2020
Male, age 76, both hemispheres
184.5
1875
Female, age 85, both hemispheres
141.0
2329
Male, age 80, right hemisphere
137.3
2561
Female, age 91, both hemispheres
130.1
Ventral periolivary nuclei nTPM: 142.9
2023
Male, age 76, both hemispheres
198.0
2165
Male, age 80, both hemispheres
140.6
2794
Female, age 91, left hemisphere
137.4
2130
Female, age 85, both hemispheres
95.6
Ventrolateral tegmental area, A5 NE cell group nTPM: 179.2
2359
Male, age 61, both hemispheres
260.5
2161
Male, age 80, both hemispheres
174.5
1959
Male, age 76, both hemispheres
163.2
2840
Female, age 85, both hemispheres
161.0
2456
Female, age 91, both hemispheres
159.6
2449
Male, age 74, both hemispheres
156.3
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
