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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
131.9
nTPM
Monaco:
36.3
nTPM
Schmiedel:
47.9
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
131.9
HPA sample
nTPM
gdT-cell nTPM: 80.7
Samples: 6
Max nTPM: 95.1
Min nTPM: 59.3
P10809_1007
59.3
P10809_1022
78.2
P10809_1041
95.1
P10809_1060
81.5
P10809_1077
79.9
P10809_1098
90.0
MAIT T-cell nTPM: 77.8
Samples: 6
Max nTPM: 106.0
Min nTPM: 45.4
P10809_1006
45.4
P10809_1024
87.2
P10809_1043
106.0
P10809_1062
79.2
P10809_1083
48.0
P10809_1097
100.7
Memory CD4 T-cell nTPM: 97.7
Samples: 6
Max nTPM: 116.7
Min nTPM: 67.6
P10809_1014
67.6
P10809_1026
116.7
P10809_1045
107.5
P10809_1064
103.6
P10809_1086
95.8
P10809_1113
95.2
Memory CD8 T-cell nTPM: 92.0
Samples: 5
Max nTPM: 101.8
Min nTPM: 63.0
P10809_1012
63.0
P10809_1027
101.8
P10809_1046
93.9
P10809_1065
100.8
P10809_1111
100.7
Naive CD4 T-cell nTPM: 89.4
Samples: 6
Max nTPM: 145.4
Min nTPM: 52.5
P10809_1015
52.5
P10809_1030
93.1
P10809_1049
145.4
P10809_1068
75.5
P10809_1085
93.2
P10809_1112
76.6
Naive CD8 T-cell nTPM: 77.2
Samples: 6
Max nTPM: 89.8
Min nTPM: 50.5
P10809_1016
50.5
P10809_1031
79.7
P10809_1050
84.8
P10809_1069
89.8
P10809_1087
84.3
P10809_1110
74.0
T-reg nTPM: 131.9
Samples: 6
Max nTPM: 152.8
Min nTPM: 113.6
P10809_1018
113.6
P10809_1037
139.6
P10809_1056
133.9
P10809_1075
115.3
P10809_1094
152.8
P10809_1106
136.0
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
36.3
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 21.8
Samples: 4
Max nTPM: 36.0
Min nTPM: 15.3
RHH5202_R3573
17.4
RHH5230_R3602
15.3
RHH5259_R3631
18.5
RHH5288_R3660
36.0
Effector memory CD8 T-cell nTPM: 24.1
Samples: 4
Max nTPM: 33.4
Min nTPM: 17.2
RHH5203_R3574
33.4
RHH5231_R3603
18.8
RHH5260_R3632
26.9
RHH5289_R3661
17.2
MAIT T-cell nTPM: 29.2
Samples: 4
Max nTPM: 50.0
Min nTPM: 18.4
RHH5233_R3605
18.4
RHH5205_R3576
23.4
RHH5262_R3634
25.0
RHH5297_R3663
50.0
Memory CD4 T-cell TFH nTPM: 33.3
Samples: 4
Max nTPM: 49.9
Min nTPM: 23.6
RHH5300_R3666
23.8
RHH5236_R3608
49.9
RHH5265_R3637
23.6
RHH5208_R3579
35.8
Memory CD4 T-cell Th1 nTPM: 28.2
Samples: 4
Max nTPM: 42.3
Min nTPM: 18.2
RHH5210_R3581
26.0
RHH5302_R3668
42.3
RHH5238_R3610
26.3
RHH5267_R3639
18.2
Memory CD4 T-cell Th1/Th17 nTPM: 25.6
Samples: 4
Max nTPM: 34.0
Min nTPM: 12.3
RHH5303_R3669
34.0
RHH5211_R3582
27.0
RHH5239_R3611
12.3
RHH5268_R3640
29.2
Memory CD4 T-cell Th17 nTPM: 21.6
Samples: 4
Max nTPM: 33.0
Min nTPM: 16.3
RHH5304_R3670
33.0
RHH5212_R3583
18.5
RHH5240_R3612
18.4
RHH5269_R3641
16.3
Memory CD4 T-cell Th2 nTPM: 27.7
Samples: 4
Max nTPM: 36.5
Min nTPM: 20.8
RHH5305_R3671
36.5
RHH5213_R3584
29.1
RHH5241_R3613
24.2
RHH5270_R3642
20.8
Naive CD4 T-cell nTPM: 24.7
Samples: 4
Max nTPM: 38.6
Min nTPM: 17.7
RHH5306_R3672
20.8
RHH5214_R3585
38.6
RHH5242_R3614
17.7
RHH5271_R3643
21.5
Naive CD8 T-cell nTPM: 17.8
Samples: 4
Max nTPM: 20.4
Min nTPM: 12.9
RHH5201_R3572
12.9
RHH5229_R3601
18.7
RHH5258_R3630
20.4
RHH5287_R3659
19.1
Non-Vd2 gdTCR nTPM: 24.9
Samples: 4
Max nTPM: 33.8
Min nTPM: 17.4
RHH5235_R3607
25.5
RHH5264_R3636
17.4
RHH5207_R3578
22.7
RHH5299_R3665
33.8
T-reg nTPM: 33.0
Samples: 4
Max nTPM: 37.8
Min nTPM: 25.6
RHH5301_R3667
37.8
RHH5237_R3609
34.5
RHH5266_R3638
25.6
RHH5209_R3580
34.2
Terminal effector memory CD4 T-cell nTPM: 19.9
Samples: 2
Max nTPM: 24.7
Min nTPM: 15.0
RHH5243_R3615
15.0
RHH5272_R3644
24.7
Terminal effector memory CD8 T-cell nTPM: 36.3
Samples: 4
Max nTPM: 58.1
Min nTPM: 25.3
RHH5232_R3604
28.9
RHH5204_R3575
58.1
RHH5261_R3633
25.3
RHH5296_R3662
32.7
Vd2 gdTCR nTPM: 31.0
Samples: 4
Max nTPM: 51.2
Min nTPM: 10.1
RHH5234_R3606
26.9
RHH5206_R3577
51.2
RHH5263_R3635
10.1
RHH5298_R3664
35.9
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
