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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
57.3
nTPM
Monaco:
44.8
nTPM
Schmiedel:
35.5
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
57.3
HPA sample
nTPM
gdT-cell nTPM: 47.3
Samples: 6
Max nTPM: 57.1
Min nTPM: 33.9
P10809_1007
33.9
P10809_1022
54.1
P10809_1041
57.1
P10809_1060
49.1
P10809_1077
47.0
P10809_1098
42.4
MAIT T-cell nTPM: 46.4
Samples: 6
Max nTPM: 55.0
Min nTPM: 36.6
P10809_1006
36.6
P10809_1024
37.0
P10809_1043
54.1
P10809_1062
55.0
P10809_1083
43.4
P10809_1097
52.4
Memory CD4 T-cell nTPM: 42.7
Samples: 6
Max nTPM: 46.4
Min nTPM: 37.4
P10809_1014
37.4
P10809_1026
44.4
P10809_1045
39.0
P10809_1064
44.4
P10809_1086
46.4
P10809_1113
44.6
Memory CD8 T-cell nTPM: 41.8
Samples: 5
Max nTPM: 49.3
Min nTPM: 32.8
P10809_1012
32.8
P10809_1027
45.3
P10809_1046
39.4
P10809_1065
49.3
P10809_1111
42.3
Naive CD4 T-cell nTPM: 42.1
Samples: 6
Max nTPM: 51.9
Min nTPM: 29.8
P10809_1015
29.8
P10809_1030
51.9
P10809_1049
49.4
P10809_1068
40.8
P10809_1085
37.3
P10809_1112
43.2
Naive CD8 T-cell nTPM: 38.1
Samples: 6
Max nTPM: 55.3
Min nTPM: 26.0
P10809_1016
31.1
P10809_1031
26.0
P10809_1050
34.2
P10809_1069
55.3
P10809_1087
44.7
P10809_1110
37.3
T-reg nTPM: 57.3
Samples: 6
Max nTPM: 75.1
Min nTPM: 41.2
P10809_1018
41.2
P10809_1037
72.3
P10809_1056
75.1
P10809_1075
46.6
P10809_1094
60.5
P10809_1106
48.1
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
44.8
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 34.9
Samples: 4
Max nTPM: 43.5
Min nTPM: 18.3
RHH5202_R3573
41.6
RHH5230_R3602
36.2
RHH5259_R3631
18.3
RHH5288_R3660
43.5
Effector memory CD8 T-cell nTPM: 44.8
Samples: 4
Max nTPM: 52.1
Min nTPM: 35.9
RHH5203_R3574
35.9
RHH5231_R3603
48.5
RHH5260_R3632
42.6
RHH5289_R3661
52.1
MAIT T-cell nTPM: 32.7
Samples: 4
Max nTPM: 41.0
Min nTPM: 19.3
RHH5233_R3605
41.0
RHH5205_R3576
19.3
RHH5262_R3634
38.1
RHH5297_R3663
32.4
Memory CD4 T-cell TFH nTPM: 44.0
Samples: 4
Max nTPM: 55.5
Min nTPM: 29.4
RHH5300_R3666
45.0
RHH5236_R3608
55.5
RHH5265_R3637
45.9
RHH5208_R3579
29.4
Memory CD4 T-cell Th1 nTPM: 28.7
Samples: 4
Max nTPM: 38.4
Min nTPM: 13.3
RHH5210_R3581
29.0
RHH5302_R3668
33.9
RHH5238_R3610
13.3
RHH5267_R3639
38.4
Memory CD4 T-cell Th1/Th17 nTPM: 37.5
Samples: 4
Max nTPM: 53.0
Min nTPM: 15.3
RHH5303_R3669
44.7
RHH5211_R3582
53.0
RHH5239_R3611
15.3
RHH5268_R3640
37.1
Memory CD4 T-cell Th17 nTPM: 29.3
Samples: 4
Max nTPM: 42.7
Min nTPM: 15.0
RHH5304_R3670
35.8
RHH5212_R3583
42.7
RHH5240_R3612
15.0
RHH5269_R3641
23.5
Memory CD4 T-cell Th2 nTPM: 38.4
Samples: 4
Max nTPM: 44.4
Min nTPM: 34.3
RHH5305_R3671
36.1
RHH5213_R3584
44.4
RHH5241_R3613
38.8
RHH5270_R3642
34.3
Naive CD4 T-cell nTPM: 33.6
Samples: 4
Max nTPM: 39.2
Min nTPM: 29.7
RHH5306_R3672
31.5
RHH5214_R3585
39.2
RHH5242_R3614
34.0
RHH5271_R3643
29.7
Naive CD8 T-cell nTPM: 38.7
Samples: 4
Max nTPM: 48.3
Min nTPM: 28.3
RHH5201_R3572
40.4
RHH5229_R3601
28.3
RHH5258_R3630
48.3
RHH5287_R3659
37.8
Non-Vd2 gdTCR nTPM: 41.2
Samples: 4
Max nTPM: 52.5
Min nTPM: 23.7
RHH5235_R3607
23.7
RHH5264_R3636
51.5
RHH5207_R3578
52.5
RHH5299_R3665
36.9
T-reg nTPM: 40.4
Samples: 4
Max nTPM: 48.8
Min nTPM: 34.3
RHH5301_R3667
43.3
RHH5237_R3609
48.8
RHH5266_R3638
34.3
RHH5209_R3580
35.0
Terminal effector memory CD4 T-cell nTPM: 27.4
Samples: 2
Max nTPM: 33.3
Min nTPM: 21.4
RHH5243_R3615
21.4
RHH5272_R3644
33.3
Terminal effector memory CD8 T-cell nTPM: 35.4
Samples: 4
Max nTPM: 38.0
Min nTPM: 30.4
RHH5232_R3604
30.4
RHH5204_R3575
35.5
RHH5261_R3633
38.0
RHH5296_R3662
37.7
Vd2 gdTCR nTPM: 37.9
Samples: 4
Max nTPM: 43.5
Min nTPM: 29.7
RHH5234_R3606
41.2
RHH5206_R3577
43.5
RHH5263_R3635
29.7
RHH5298_R3664
37.0
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
