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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
74.7
nTPM
Monaco:
234.8
nTPM
Schmiedel:
52.3
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
74.7
HPA sample
nTPM
gdT-cell nTPM: 69.5
Samples: 6
Max nTPM: 86.0
Min nTPM: 49.5
P10809_1007
86.0
P10809_1022
85.1
P10809_1041
71.2
P10809_1060
49.5
P10809_1077
56.4
P10809_1098
69.0
MAIT T-cell nTPM: 74.7
Samples: 6
Max nTPM: 101.9
Min nTPM: 59.8
P10809_1006
101.9
P10809_1024
72.5
P10809_1043
75.5
P10809_1062
66.9
P10809_1083
59.8
P10809_1097
71.8
Memory CD4 T-cell nTPM: 44.7
Samples: 6
Max nTPM: 54.5
Min nTPM: 37.4
P10809_1014
37.9
P10809_1026
39.5
P10809_1045
46.8
P10809_1064
54.5
P10809_1086
52.0
P10809_1113
37.4
Memory CD8 T-cell nTPM: 60.2
Samples: 5
Max nTPM: 65.1
Min nTPM: 54.6
P10809_1012
59.4
P10809_1027
64.2
P10809_1046
65.1
P10809_1065
57.8
P10809_1111
54.6
Naive CD4 T-cell nTPM: 14.3
Samples: 6
Max nTPM: 30.0
Min nTPM: 10.1
P10809_1015
11.0
P10809_1030
13.0
P10809_1049
10.3
P10809_1068
10.1
P10809_1085
30.0
P10809_1112
11.6
Naive CD8 T-cell nTPM: 37.5
Samples: 6
Max nTPM: 50.8
Min nTPM: 28.4
P10809_1016
29.1
P10809_1031
37.1
P10809_1050
35.6
P10809_1069
43.8
P10809_1087
50.8
P10809_1110
28.4
T-reg nTPM: 36.0
Samples: 6
Max nTPM: 45.5
Min nTPM: 30.0
P10809_1018
33.7
P10809_1037
37.7
P10809_1056
33.2
P10809_1075
30.0
P10809_1094
45.5
P10809_1106
35.6
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
234.8
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 109.3
Samples: 4
Max nTPM: 127.0
Min nTPM: 68.7
RHH5202_R3573
68.7
RHH5230_R3602
122.4
RHH5259_R3631
127.0
RHH5288_R3660
119.1
Effector memory CD8 T-cell nTPM: 154.4
Samples: 4
Max nTPM: 178.8
Min nTPM: 108.9
RHH5203_R3574
108.9
RHH5231_R3603
178.8
RHH5260_R3632
161.0
RHH5289_R3661
168.8
MAIT T-cell nTPM: 220.4
Samples: 4
Max nTPM: 245.2
Min nTPM: 186.0
RHH5233_R3605
245.2
RHH5205_R3576
208.7
RHH5262_R3634
186.0
RHH5297_R3663
241.5
Memory CD4 T-cell TFH nTPM: 81.8
Samples: 4
Max nTPM: 109.0
Min nTPM: 36.1
RHH5300_R3666
101.1
RHH5236_R3608
80.8
RHH5265_R3637
109.0
RHH5208_R3579
36.1
Memory CD4 T-cell Th1 nTPM: 92.9
Samples: 4
Max nTPM: 113.5
Min nTPM: 75.6
RHH5210_R3581
75.6
RHH5302_R3668
96.1
RHH5238_R3610
113.5
RHH5267_R3639
86.3
Memory CD4 T-cell Th1/Th17 nTPM: 140.2
Samples: 4
Max nTPM: 170.9
Min nTPM: 121.5
RHH5303_R3669
121.5
RHH5211_R3582
123.4
RHH5239_R3611
170.9
RHH5268_R3640
144.8
Memory CD4 T-cell Th17 nTPM: 167.0
Samples: 4
Max nTPM: 195.8
Min nTPM: 125.3
RHH5304_R3670
195.8
RHH5212_R3583
152.6
RHH5240_R3612
194.4
RHH5269_R3641
125.3
Memory CD4 T-cell Th2 nTPM: 98.5
Samples: 4
Max nTPM: 104.3
Min nTPM: 94.6
RHH5305_R3671
104.3
RHH5213_R3584
94.6
RHH5241_R3613
99.6
RHH5270_R3642
95.3
Naive CD4 T-cell nTPM: 28.5
Samples: 4
Max nTPM: 38.3
Min nTPM: 15.1
RHH5306_R3672
35.4
RHH5214_R3585
25.2
RHH5242_R3614
38.3
RHH5271_R3643
15.1
Naive CD8 T-cell nTPM: 44.1
Samples: 4
Max nTPM: 63.1
Min nTPM: 12.4
RHH5201_R3572
12.4
RHH5229_R3601
63.1
RHH5258_R3630
50.3
RHH5287_R3659
50.5
Non-Vd2 gdTCR nTPM: 146.5
Samples: 4
Max nTPM: 170.0
Min nTPM: 113.6
RHH5235_R3607
170.0
RHH5264_R3636
113.6
RHH5207_R3578
156.0
RHH5299_R3665
146.4
T-reg nTPM: 72.7
Samples: 4
Max nTPM: 77.5
Min nTPM: 62.1
RHH5301_R3667
77.5
RHH5237_R3609
74.1
RHH5266_R3638
77.1
RHH5209_R3580
62.1
Terminal effector memory CD4 T-cell nTPM: 234.8
Samples: 2
Max nTPM: 269.5
Min nTPM: 200.1
RHH5243_R3615
269.5
RHH5272_R3644
200.1
Terminal effector memory CD8 T-cell nTPM: 173.2
Samples: 4
Max nTPM: 214.5
Min nTPM: 112.0
RHH5232_R3604
198.1
RHH5204_R3575
112.0
RHH5261_R3633
214.5
RHH5296_R3662
168.3
Vd2 gdTCR nTPM: 174.8
Samples: 4
Max nTPM: 211.0
Min nTPM: 142.1
RHH5234_R3606
211.0
RHH5206_R3577
142.1
RHH5263_R3635
183.5
RHH5298_R3664
162.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
