We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
CCNYL1
SECTIONS
  • TISSUE
  • BRAIN
  • SINGLE CELL TYPE
  • TISSUE CELL TYPE
  • PATHOLOGY
  • DISEASE
  • IMMUNE CELL
  • BLOOD PROTEIN
  • SUBCELLULAR
  • CELL LINE
  • STRUCTURE
  • INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
  • SARS-COV-2
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Patient ID
Tissue
Category
Cluster
Reliability
Brain region
Category
Brain region
Category
Brain region
Category
Cluster
Reliability
Cell type
Category
Cluster
Tissue
Cell type
Enrichment
Cancer
Prognosis
Cancer
Category
Cell type
Category
Cell lineage
Category
Cluster
Annotation
Disease
Location
Searches
Location
Cell line
Type
Phase
Reliability
Cancer type
Category
Cluster
Interacting gene
Number of interactions
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Protein structure
In atlas
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • TISSUE CELL

  • PATHOLOGY

  • DISEASE

  • IMMUNE

  • BLOOD

  • SUBCELL

  • CELL LINE

  • STRUCTURE

  • INTERACTION

  • CCNYL1
IMMUNE CELL MONOCYTES Show tissue menu
B-CELLS DENDRITIC CELLS GRANULOCYTES MONOCYTES NK-CELLS PROGENITORS T-CELLS TOTAL PBMC
Immune cell proteome
Monocytes
MONOCYTES - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
HPA:1.1 nTPM
Monaco:10.1 nTPM
Schmiedel:21.3 TPM

MONOCYTES - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM 1.1
HPA sample nTPM
Classical monocyte
nTPM: 1.1
Samples: 6

Max nTPM: 2.2
Min nTPM: 0.5
P10809_1003 0.8
P10809_1020 0.9
P10809_1039 0.5
P10809_1058 2.2
P10809_1080 1.2
P10809_1107 0.8
Intermediate monocyte
nTPM: 0.6
Samples: 6

Max nTPM: 1.2
Min nTPM: 0.0
P10809_1004 0.5
P10809_1023 0.1
P10809_1042 0.9
P10809_1061 0.0
P10809_1081 1.2
P10809_1108 0.6
Non-classical monocyte
nTPM: 0.5
Samples: 5

Max nTPM: 0.9
Min nTPM: 0.0
P10809_1005 0.6
P10809_1053 0.2
P10809_1072 0.0
P10809_1082 0.9
P10809_1109 0.9

MONOCYTES - Monaco RNA-seqi

RNA-Seq data generated by Monaco et al is reported as average nTPM.

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max nTPM 10.1
Monaco sample nTPM
Classical monocyte
nTPM: 10.1
Samples: 4

Max nTPM: 12.5
Min nTPM: 6.2
RHH5313_R3680 11.4
RHH5221_R3593 10.1
RHH5250_R3622 12.5
RHH5279_R3651 6.2
Intermediate monocyte
nTPM: 7.8
Samples: 4

Max nTPM: 12.5
Min nTPM: 4.2
RHH5314_R3681 7.0
RHH5222_R3594 4.2
RHH5251_R3623 12.5
RHH5280_R3652 7.5
Non-classical monocyte
nTPM: 6.5
Samples: 4

Max nTPM: 8.1
Min nTPM: 5.0
RHH5315_R3682 5.0
RHH5223_R3595 5.3
RHH5252_R3624 8.1
RHH5281_R3653 7.4

MONOCYTES - Schmiedel RNA-seqi

RNA-Seq data generated by Schmiedel et al is reported as average TPM.

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.

Max TPM 21.3
Schmiedel sample id TPM
Classical monocyte
TPM: 21.3
Samples: 91

Max TPM: 27.5
Min TPM: 15.6
MONOCYTES_1 27.5
MONOCYTES_2 27.3
MONOCYTES_3 27.0
MONOCYTES_4 27.0
MONOCYTES_5 26.4
MONOCYTES_6 26.2
MONOCYTES_7 26.2
MONOCYTES_8 25.6
MONOCYTES_9 25.4
MONOCYTES_10 25.2
MONOCYTES_11 24.8
MONOCYTES_12 24.7
MONOCYTES_13 24.4
MONOCYTES_14 24.4
MONOCYTES_15 24.0
MONOCYTES_16 23.8
MONOCYTES_17 23.7
MONOCYTES_18 23.6
MONOCYTES_19 23.6
MONOCYTES_20 23.4
MONOCYTES_21 23.2
MONOCYTES_22 23.2
MONOCYTES_23 23.2
MONOCYTES_24 23.0
MONOCYTES_25 23.0
MONOCYTES_26 22.9
MONOCYTES_27 22.8
MONOCYTES_28 22.7
MONOCYTES_29 22.6
MONOCYTES_30 22.5
MONOCYTES_31 22.2
MONOCYTES_32 22.2
MONOCYTES_33 22.1
MONOCYTES_34 22.0
MONOCYTES_35 22.0
MONOCYTES_36 21.9
MONOCYTES_37 21.9
MONOCYTES_38 21.9
MONOCYTES_39 21.8
MONOCYTES_40 21.6
MONOCYTES_41 21.6
MONOCYTES_42 21.6
MONOCYTES_43 21.4
MONOCYTES_44 21.4
MONOCYTES_45 21.4
MONOCYTES_46 21.3
MONOCYTES_47 21.3
MONOCYTES_48 20.9
MONOCYTES_49 20.8
MONOCYTES_50 20.8
MONOCYTES_51 20.8
MONOCYTES_52 20.6
MONOCYTES_53 20.5
MONOCYTES_54 20.5
MONOCYTES_55 20.4
MONOCYTES_56 20.4
MONOCYTES_57 20.2
MONOCYTES_58 20.2
MONOCYTES_59 20.2
MONOCYTES_60 20.1
MONOCYTES_61 20.1
MONOCYTES_62 20.0
MONOCYTES_63 20.0
MONOCYTES_64 19.9
MONOCYTES_65 19.8
MONOCYTES_66 19.7
MONOCYTES_67 19.7
MONOCYTES_68 19.6
MONOCYTES_69 19.5
MONOCYTES_70 19.2
MONOCYTES_71 19.1
MONOCYTES_72 19.1
MONOCYTES_73 18.9
MONOCYTES_74 18.9
MONOCYTES_75 18.8
MONOCYTES_76 18.8
MONOCYTES_77 18.6
MONOCYTES_78 18.5
MONOCYTES_79 18.5
MONOCYTES_80 17.6
MONOCYTES_81 17.5
MONOCYTES_82 17.2
MONOCYTES_83 17.1
MONOCYTES_84 16.8
MONOCYTES_85 16.8
MONOCYTES_86 16.6
MONOCYTES_87 16.4
MONOCYTES_88 16.3
MONOCYTES_89 15.9
MONOCYTES_90 15.8
MONOCYTES_91 15.6
Show allShow less
Non-classical monocyte
TPM: 11.7
Samples: 90

Max TPM: 16.8
Min TPM: 5.9
M2_1 16.8
M2_2 16.1
M2_3 15.4
M2_4 15.4
M2_5 15.1
M2_6 14.7
M2_7 14.3
M2_8 14.2
M2_9 14.2
M2_10 14.2
M2_11 14.2
M2_12 14.0
M2_13 13.8
M2_14 13.7
M2_15 13.5
M2_16 13.5
M2_17 13.5
M2_18 13.4
M2_19 13.2
M2_20 13.2
M2_21 13.2
M2_22 13.1
M2_23 13.1
M2_24 13.0
M2_25 12.9
M2_26 12.9
M2_27 12.8
M2_28 12.7
M2_29 12.6
M2_30 12.6
M2_31 12.5
M2_32 12.4
M2_33 12.4
M2_34 12.2
M2_35 12.1
M2_36 12.1
M2_37 12.1
M2_38 12.0
M2_39 12.0
M2_40 11.9
M2_41 11.9
M2_42 11.8
M2_43 11.8
M2_44 11.6
M2_45 11.5
M2_46 11.5
M2_47 11.5
M2_48 11.4
M2_49 11.4
M2_50 11.4
M2_51 11.4
M2_52 11.4
M2_53 11.3
M2_54 11.3
M2_55 11.3
M2_56 11.3
M2_57 11.2
M2_58 11.2
M2_59 11.2
M2_60 11.1
M2_61 11.1
M2_62 11.0
M2_63 11.0
M2_64 11.0
M2_65 10.9
M2_66 10.8
M2_67 10.8
M2_68 10.7
M2_69 10.6
M2_70 10.4
M2_71 10.4
M2_72 10.3
M2_73 10.1
M2_74 10.1
M2_75 9.9
M2_76 9.9
M2_77 9.8
M2_78 9.6
M2_79 9.6
M2_80 9.4
M2_81 9.1
M2_82 8.9
M2_83 8.9
M2_84 8.9
M2_85 8.8
M2_86 8.1
M2_87 8.0
M2_88 7.9
M2_89 7.8
M2_90 5.9
Show allShow less

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org