HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:11.9 nTPM
HPA Brain:21.6 nTPM
GTEx:11.9 nTPM
FANTOM5:29.0 Scaled Tags Per Million
Pig:17.9 nTPM
Mouse:23.6 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA000499Antibody HPA046891
Glial cells Not detectedLow
Neuronal cells Not detectedMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 21.6
Sample id Sample description nTPM
Hippocampus
nTPM: 17.9
1898 Male, age 80, left hemisphere 21.2
1911 Female, age 85, right hemisphere 19.5
1855 Male, age 76, left hemisphere 18.1
2529 Female, age 94, left hemisphere 17.1
2621 Female, age 67, right hemisphere 16.0
2148 Female, age 91, left hemisphere 15.4
Dentate gyrus
nTPM: 18.2
1927 Female, age 91, both hemispheres 23.6
2010 Male, age 76, both hemispheres 19.3
2246 Female, age 85, both hemispheres 18.4
2528 Male, age 74, both hemispheres 18.3
2531 Female, age 67, both hemispheres 16.3
2530 Female, age 94, left hemisphere 13.6
Entorhinal gyrus
nTPM: 17.0
1938 Female, age 85, left hemisphere 22.3
2117 Female, age 91, right hemisphere 17.8
1787 Male, age 76, left hemisphere 16.6
2764 Male, age 80, right hemisphere 15.2
2686 Male, age 75, right hemisphere 15.0
2613 Female, age 94, left hemisphere 14.9
Hippocampus, CA1
nTPM: 20.2
2749 Male, age 80, left hemisphere 24.0
1873 Female, age 85, both hemispheres 22.0
2527 Male, age 74, both hemispheres 18.6
2045 Male, age 76, both hemispheres 18.4
2082 Female, age 91, right hemisphere 18.1
Hippocampus, CA2
nTPM: 18.9
1892 Male, age 76, both hemispheres 24.3
1963 Male, age 80, left hemisphere 19.2
1940 Female, age 85, left hemisphere 18.2
2249 Male, age 74, both hemispheres 17.7
2437 Female, age 94, left hemisphere 17.2
2113 Female, age 91, right hemisphere 16.6
Hippocampus, CA3
nTPM: 19.4
2137 Male, age 80, left hemisphere 21.8
1867 Male, age 76, both hemispheres 21.0
1891 Female, age 85, both hemispheres 20.4
2436 Male, age 74, both hemispheres 18.9
2620 Female, age 94, left hemisphere 18.4
2861 Female, age 67, both hemispheres 16.0
Parahippocampal cortex
nTPM: 19.5
2693 Female, age 94, both hemispheres 23.5
1850 Male, age 80, both hemispheres 23.3
1933 Female, age 85, both hemispheres 20.8
2532 Female, age 72, left hemisphere 20.2
1990 Female, age 91, right hemisphere 19.6
2250 Female, age 67, right hemisphere 19.2
2245 Female, age 91, both hemispheres 18.7
2018 Male, age 76, both hemispheres 18.6
2692 Male, age 74, both hemispheres 16.4
2622 Female, age 67, right hemisphere 15.1
Perirhinal gyrus
nTPM: 21.6
1841 Female, age 85, right hemisphere 25.7
2848 Male, age 76, right hemisphere 21.8
1794 Male, age 80, right hemisphere 21.2
1847 Female, age 91, left hemisphere 21.1
2521 Female, age 94, right hemisphere 18.1
Subiculum
nTPM: 17.8
1901 Male, age 80, both hemispheres 21.2
2438 Female, age 94, left hemisphere 18.6
2729 Female, age 91, right hemisphere 17.5
1977 Female, age 85, both hemispheres 17.2
2042 Male, age 76, both hemispheres 16.7
2619 Male, age 74, both hemispheres 15.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 11.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 11.9
Samples: 197

Max nTPM: 28.3
Min nTPM: 6.8
Std nTPM: 2.9
Median nTPM: 11.6
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 28.3
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 19.9
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 18.8
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 18.3
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 18.3
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 18.1
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 17.8
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 17.7
GTEX-11GS4-0011-R1a-SM-DO129 60-69 years, male 17.2
GTEX-1A3MX-0011-R1b-SM-7P8PH 60-69 years, male 17.0
GTEX-11GSP-0011-R1a-SM-9QEJ3 60-69 years, female 16.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 29.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 29.0
FF:10169-103B7 60 years, female 32.1
FF:10153-102I9 76 years, female 25.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 17.9
Pig sample Sample description nTPM
Subiculum
nTPM: 16.1
Samples: 4

Max nTPM: 17.1
Min nTPM: 15.2
Sample A Female 15.2
Sample B Female 15.9
Sample C Male 16.0
Sample D Male 17.1
Dorsal hippocampus
nTPM: 17.9
Samples: 4

Max nTPM: 18.6
Min nTPM: 16.5
Sample A Female 18.3
Sample B Female 18.6
Sample C Male 18.2
Sample D Male 16.5
Entorhinal cortex
nTPM: 16.7
Samples: 4

Max nTPM: 19.4
Min nTPM: 15.1
Sample A Female 16.2
Sample B Female 19.4
Sample C Male 15.1
Sample D Male 16.0
Ventral hippocampus
nTPM: 16.0
Samples: 4

Max nTPM: 17.9
Min nTPM: 12.5
Sample A Female 16.5
Sample B Female 17.9
Sample C Male 12.5
Sample D Male 16.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 23.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 21.7
Samples: 4

Max nTPM: 24.2
Min nTPM: 16.9
Sample A Male 22.2
Sample B Male 24.2
Sample C Female 23.3
Sample D Female 16.9
Hippocampal formation
nTPM: 23.7
Samples: 4

Max nTPM: 25.1
Min nTPM: 21.1
Sample A Male 24.5
Sample B Male 21.1
Sample C Female 25.1
Sample D Female 23.9

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