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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
40.4
nTPM
Monaco:
125.2
nTPM
Schmiedel:
62.2
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
40.4
HPA sample
nTPM
gdT-cell nTPM: 12.8
Samples: 6
Max nTPM: 23.5
Min nTPM: 8.5
P10809_1007
23.5
P10809_1022
8.8
P10809_1041
9.2
P10809_1060
8.5
P10809_1077
12.3
P10809_1098
14.4
MAIT T-cell nTPM: 13.8
Samples: 6
Max nTPM: 21.1
Min nTPM: 2.7
P10809_1006
17.1
P10809_1024
2.7
P10809_1043
9.6
P10809_1062
18.5
P10809_1083
21.1
P10809_1097
13.8
Memory CD4 T-cell nTPM: 21.4
Samples: 6
Max nTPM: 26.4
Min nTPM: 15.0
P10809_1014
18.9
P10809_1026
15.0
P10809_1045
24.9
P10809_1064
19.3
P10809_1086
26.4
P10809_1113
24.1
Memory CD8 T-cell nTPM: 13.0
Samples: 5
Max nTPM: 16.9
Min nTPM: 6.3
P10809_1012
16.9
P10809_1027
6.3
P10809_1046
14.8
P10809_1065
14.7
P10809_1111
12.4
Naive CD4 T-cell nTPM: 11.3
Samples: 6
Max nTPM: 18.5
Min nTPM: 5.6
P10809_1015
12.1
P10809_1030
5.6
P10809_1049
10.4
P10809_1068
12.0
P10809_1085
9.0
P10809_1112
18.5
Naive CD8 T-cell nTPM: 5.8
Samples: 6
Max nTPM: 11.0
Min nTPM: 1.9
P10809_1016
4.8
P10809_1031
1.9
P10809_1050
2.4
P10809_1069
11.0
P10809_1087
10.3
P10809_1110
4.5
T-reg nTPM: 40.4
Samples: 6
Max nTPM: 45.5
Min nTPM: 36.2
P10809_1018
45.5
P10809_1037
36.2
P10809_1056
37.9
P10809_1075
38.3
P10809_1094
45.3
P10809_1106
39.4
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
125.2
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 45.6
Samples: 4
Max nTPM: 75.1
Min nTPM: 19.0
RHH5202_R3573
19.0
RHH5230_R3602
75.1
RHH5259_R3631
50.1
RHH5288_R3660
38.1
Effector memory CD8 T-cell nTPM: 67.9
Samples: 4
Max nTPM: 93.8
Min nTPM: 51.8
RHH5203_R3574
51.8
RHH5231_R3603
71.0
RHH5260_R3632
93.8
RHH5289_R3661
55.1
MAIT T-cell nTPM: 51.3
Samples: 4
Max nTPM: 68.4
Min nTPM: 32.1
RHH5233_R3605
57.5
RHH5205_R3576
68.4
RHH5262_R3634
32.1
RHH5297_R3663
47.1
Memory CD4 T-cell TFH nTPM: 62.2
Samples: 4
Max nTPM: 74.0
Min nTPM: 40.5
RHH5300_R3666
74.0
RHH5236_R3608
66.3
RHH5265_R3637
68.1
RHH5208_R3579
40.5
Memory CD4 T-cell Th1 nTPM: 110.8
Samples: 4
Max nTPM: 203.5
Min nTPM: 64.6
RHH5210_R3581
64.6
RHH5302_R3668
68.6
RHH5238_R3610
203.5
RHH5267_R3639
106.5
Memory CD4 T-cell Th1/Th17 nTPM: 125.2
Samples: 4
Max nTPM: 186.9
Min nTPM: 57.8
RHH5303_R3669
57.8
RHH5211_R3582
124.8
RHH5239_R3611
186.9
RHH5268_R3640
131.3
Memory CD4 T-cell Th17 nTPM: 125.0
Samples: 4
Max nTPM: 161.8
Min nTPM: 90.9
RHH5304_R3670
90.9
RHH5212_R3583
99.3
RHH5240_R3612
161.8
RHH5269_R3641
147.9
Memory CD4 T-cell Th2 nTPM: 82.8
Samples: 4
Max nTPM: 90.5
Min nTPM: 76.0
RHH5305_R3671
79.5
RHH5213_R3584
76.0
RHH5241_R3613
85.1
RHH5270_R3642
90.5
Naive CD4 T-cell nTPM: 49.9
Samples: 4
Max nTPM: 70.6
Min nTPM: 32.1
RHH5306_R3672
49.2
RHH5214_R3585
32.1
RHH5242_R3614
70.6
RHH5271_R3643
47.6
Naive CD8 T-cell nTPM: 21.3
Samples: 4
Max nTPM: 37.4
Min nTPM: 6.7
RHH5201_R3572
6.7
RHH5229_R3601
37.4
RHH5258_R3630
15.5
RHH5287_R3659
25.6
Non-Vd2 gdTCR nTPM: 21.0
Samples: 4
Max nTPM: 51.1
Min nTPM: 5.4
RHH5235_R3607
51.1
RHH5264_R3636
5.4
RHH5207_R3578
15.0
RHH5299_R3665
12.4
T-reg nTPM: 78.9
Samples: 4
Max nTPM: 87.6
Min nTPM: 69.6
RHH5301_R3667
79.6
RHH5237_R3609
69.6
RHH5266_R3638
87.6
RHH5209_R3580
78.8
Terminal effector memory CD4 T-cell nTPM: 121.6
Samples: 2
Max nTPM: 138.8
Min nTPM: 104.3
RHH5243_R3615
138.8
RHH5272_R3644
104.3
Terminal effector memory CD8 T-cell nTPM: 32.8
Samples: 4
Max nTPM: 47.1
Min nTPM: 14.6
RHH5232_R3604
46.3
RHH5204_R3575
14.6
RHH5261_R3633
47.1
RHH5296_R3662
23.2
Vd2 gdTCR nTPM: 70.6
Samples: 4
Max nTPM: 89.1
Min nTPM: 42.2
RHH5234_R3606
89.1
RHH5206_R3577
62.4
RHH5263_R3635
88.6
RHH5298_R3664
42.2
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
