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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
196.2
nTPM
Monaco:
22.8
nTPM
Schmiedel:
10.9
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
196.2
HPA sample
nTPM
gdT-cell nTPM: 106.3
Samples: 6
Max nTPM: 144.2
Min nTPM: 66.9
P10809_1007
80.2
P10809_1022
66.9
P10809_1041
133.8
P10809_1060
102.3
P10809_1077
144.2
P10809_1098
110.4
MAIT T-cell nTPM: 108.9
Samples: 6
Max nTPM: 123.2
Min nTPM: 67.5
P10809_1006
67.5
P10809_1024
110.8
P10809_1043
118.0
P10809_1062
112.7
P10809_1083
121.3
P10809_1097
123.2
Memory CD4 T-cell nTPM: 126.8
Samples: 6
Max nTPM: 162.9
Min nTPM: 100.1
P10809_1014
100.1
P10809_1026
123.7
P10809_1045
109.9
P10809_1064
162.9
P10809_1086
146.0
P10809_1113
118.3
Memory CD8 T-cell nTPM: 117.3
Samples: 5
Max nTPM: 126.7
Min nTPM: 101.1
P10809_1012
101.1
P10809_1027
126.7
P10809_1046
110.9
P10809_1065
125.1
P10809_1111
122.5
Naive CD4 T-cell nTPM: 131.3
Samples: 6
Max nTPM: 156.4
Min nTPM: 91.4
P10809_1015
91.4
P10809_1030
142.7
P10809_1049
156.4
P10809_1068
146.5
P10809_1085
130.2
P10809_1112
120.7
Naive CD8 T-cell nTPM: 117.0
Samples: 6
Max nTPM: 140.3
Min nTPM: 100.7
P10809_1016
100.7
P10809_1031
116.6
P10809_1050
120.1
P10809_1069
121.5
P10809_1087
140.3
P10809_1110
102.9
T-reg nTPM: 196.2
Samples: 6
Max nTPM: 266.1
Min nTPM: 143.5
P10809_1018
143.5
P10809_1037
188.8
P10809_1056
266.1
P10809_1075
218.0
P10809_1094
184.9
P10809_1106
175.9
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
22.8
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 14.9
Samples: 4
Max nTPM: 19.9
Min nTPM: 8.3
RHH5202_R3573
19.9
RHH5230_R3602
8.3
RHH5259_R3631
16.9
RHH5288_R3660
14.6
Effector memory CD8 T-cell nTPM: 15.1
Samples: 4
Max nTPM: 21.0
Min nTPM: 6.6
RHH5203_R3574
6.6
RHH5231_R3603
21.0
RHH5260_R3632
18.9
RHH5289_R3661
13.7
MAIT T-cell nTPM: 12.2
Samples: 4
Max nTPM: 15.8
Min nTPM: 6.5
RHH5233_R3605
6.5
RHH5205_R3576
15.8
RHH5262_R3634
14.2
RHH5297_R3663
12.2
Memory CD4 T-cell TFH nTPM: 14.3
Samples: 4
Max nTPM: 24.8
Min nTPM: 8.5
RHH5300_R3666
13.8
RHH5236_R3608
24.8
RHH5265_R3637
10.2
RHH5208_R3579
8.5
Memory CD4 T-cell Th1 nTPM: 18.7
Samples: 4
Max nTPM: 25.4
Min nTPM: 10.8
RHH5210_R3581
10.8
RHH5302_R3668
18.2
RHH5238_R3610
25.4
RHH5267_R3639
20.4
Memory CD4 T-cell Th1/Th17 nTPM: 18.3
Samples: 4
Max nTPM: 20.9
Min nTPM: 15.7
RHH5303_R3669
15.7
RHH5211_R3582
18.4
RHH5239_R3611
18.1
RHH5268_R3640
20.9
Memory CD4 T-cell Th17 nTPM: 22.3
Samples: 4
Max nTPM: 28.9
Min nTPM: 16.9
RHH5304_R3670
23.6
RHH5212_R3583
16.9
RHH5240_R3612
28.9
RHH5269_R3641
19.9
Memory CD4 T-cell Th2 nTPM: 15.9
Samples: 4
Max nTPM: 23.4
Min nTPM: 7.6
RHH5305_R3671
16.6
RHH5213_R3584
23.4
RHH5241_R3613
7.6
RHH5270_R3642
16.1
Naive CD4 T-cell nTPM: 22.9
Samples: 4
Max nTPM: 31.3
Min nTPM: 10.9
RHH5306_R3672
24.3
RHH5214_R3585
31.3
RHH5242_R3614
10.9
RHH5271_R3643
24.9
Naive CD8 T-cell nTPM: 17.7
Samples: 4
Max nTPM: 23.5
Min nTPM: 8.8
RHH5201_R3572
22.7
RHH5229_R3601
15.9
RHH5258_R3630
8.8
RHH5287_R3659
23.5
Non-Vd2 gdTCR nTPM: 13.6
Samples: 4
Max nTPM: 16.7
Min nTPM: 9.6
RHH5235_R3607
14.7
RHH5264_R3636
16.7
RHH5207_R3578
9.6
RHH5299_R3665
13.5
T-reg nTPM: 21.3
Samples: 4
Max nTPM: 24.5
Min nTPM: 16.4
RHH5301_R3667
16.4
RHH5237_R3609
20.9
RHH5266_R3638
24.5
RHH5209_R3580
23.4
Terminal effector memory CD4 T-cell nTPM: 6.4
Samples: 2
Max nTPM: 6.5
Min nTPM: 6.3
RHH5243_R3615
6.5
RHH5272_R3644
6.3
Terminal effector memory CD8 T-cell nTPM: 15.7
Samples: 4
Max nTPM: 25.5
Min nTPM: 6.8
RHH5232_R3604
6.8
RHH5204_R3575
25.5
RHH5261_R3633
14.8
RHH5296_R3662
15.7
Vd2 gdTCR nTPM: 18.4
Samples: 4
Max nTPM: 27.3
Min nTPM: 9.8
RHH5234_R3606
9.8
RHH5206_R3577
27.3
RHH5263_R3635
19.2
RHH5298_R3664
17.2
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
