HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Not detected
RNA expressioni
Consensus:71.2 nTPM
HPA Brain:110.2 nTPM
GTEx:71.2 nTPM
FANTOM5:111.8 Scaled Tags Per Million
Pig:46.2 nTPM
Mouse:33.9 nTPM
Allen mouse:0.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA006949
Glial cells Medium
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 110.2
Sample id Sample description nTPM
Hippocampus
nTPM: 110.2
2529 Female, age 94, left hemisphere 141.8
2148 Female, age 91, left hemisphere 118.5
1911 Female, age 85, right hemisphere 114.2
1898 Male, age 80, left hemisphere 106.0
1855 Male, age 76, left hemisphere 96.4
2621 Female, age 67, right hemisphere 84.4
Dentate gyrus
nTPM: 85.8
2528 Male, age 74, both hemispheres 119.2
2246 Female, age 85, both hemispheres 95.8
2010 Male, age 76, both hemispheres 84.4
2530 Female, age 94, left hemisphere 78.1
1927 Female, age 91, both hemispheres 70.1
2531 Female, age 67, both hemispheres 67.3
Entorhinal gyrus
nTPM: 81.1
2117 Female, age 91, right hemisphere 123.0
1787 Male, age 76, left hemisphere 79.3
1938 Female, age 85, left hemisphere 77.6
2764 Male, age 80, right hemisphere 76.1
2686 Male, age 75, right hemisphere 73.4
2613 Female, age 94, left hemisphere 56.9
Hippocampus, CA1
nTPM: 97.2
2527 Male, age 74, both hemispheres 135.1
2082 Female, age 91, right hemisphere 115.8
1873 Female, age 85, both hemispheres 107.5
2045 Male, age 76, both hemispheres 71.6
2749 Male, age 80, left hemisphere 56.1
Hippocampus, CA2
nTPM: 93.6
2249 Male, age 74, both hemispheres 130.5
2113 Female, age 91, right hemisphere 123.5
1940 Female, age 85, left hemisphere 91.9
1963 Male, age 80, left hemisphere 86.6
2437 Female, age 94, left hemisphere 75.6
1892 Male, age 76, both hemispheres 53.2
Hippocampus, CA3
nTPM: 107.2
2436 Male, age 74, both hemispheres 208.5
1891 Female, age 85, both hemispheres 102.5
2620 Female, age 94, left hemisphere 101.6
2861 Female, age 67, both hemispheres 92.2
1867 Male, age 76, both hemispheres 74.4
2137 Male, age 80, left hemisphere 64.1
Parahippocampal cortex
nTPM: 82.4
2692 Male, age 74, both hemispheres 104.5
2622 Female, age 67, right hemisphere 95.0
2018 Male, age 76, both hemispheres 92.4
2245 Female, age 91, both hemispheres 86.5
1933 Female, age 85, both hemispheres 86.1
1990 Female, age 91, right hemisphere 82.3
2250 Female, age 67, right hemisphere 80.6
1850 Male, age 80, both hemispheres 70.6
2693 Female, age 94, both hemispheres 65.7
2532 Female, age 72, left hemisphere 60.0
Perirhinal gyrus
nTPM: 73.0
1841 Female, age 85, right hemisphere 81.9
1794 Male, age 80, right hemisphere 78.6
1847 Female, age 91, left hemisphere 78.3
2521 Female, age 94, right hemisphere 71.4
2848 Male, age 76, right hemisphere 54.9
Subiculum
nTPM: 94.8
2729 Female, age 91, right hemisphere 125.1
2619 Male, age 74, both hemispheres 123.0
2042 Male, age 76, both hemispheres 82.7
1977 Female, age 85, both hemispheres 80.6
1901 Male, age 80, both hemispheres 79.1
2438 Female, age 94, left hemisphere 78.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 71.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 71.2
Samples: 197

Max nTPM: 184.3
Min nTPM: 21.7
Std nTPM: 32.2
Median nTPM: 62.9
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 184.3
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 177.8
GTEX-13FHO-0011-R1b-SM-5KLZG 60-69 years, male 163.3
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 152.0
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 149.8
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 143.8
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 142.3
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 137.0
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 135.9
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 135.7
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 134.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 111.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 111.8
FF:10153-102I9 76 years, female 161.4
FF:10169-103B7 60 years, female 62.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 46.2
Pig sample Sample description nTPM
Subiculum
nTPM: 43.8
Samples: 4

Max nTPM: 46.3
Min nTPM: 39.1
Sample A Female 46.3
Sample B Female 46.0
Sample C Male 43.6
Sample D Male 39.1
Dorsal hippocampus
nTPM: 40.6
Samples: 4

Max nTPM: 44.3
Min nTPM: 32.0
Sample A Female 44.3
Sample B Female 43.2
Sample C Male 43.0
Sample D Male 32.0
Entorhinal cortex
nTPM: 35.5
Samples: 4

Max nTPM: 39.0
Min nTPM: 29.0
Sample A Female 34.9
Sample B Female 39.0
Sample C Male 39.0
Sample D Male 29.0
Ventral hippocampus
nTPM: 46.2
Samples: 4

Max nTPM: 61.2
Min nTPM: 41.0
Sample A Female 41.7
Sample B Female 41.0
Sample C Male 61.2
Sample D Male 41.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 33.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 32.8
Samples: 4

Max nTPM: 35.5
Min nTPM: 28.5
Sample A Male 32.2
Sample B Male 28.5
Sample C Female 34.9
Sample D Female 35.5
Hippocampal formation
nTPM: 33.9
Samples: 4

Max nTPM: 43.6
Min nTPM: 29.3
Sample A Male 31.0
Sample B Male 29.3
Sample C Female 31.6
Sample D Female 43.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.5
532728 Antisense, RP_040825_01_H01, Mouse strain C57BL/6J (56 days, male) 0.7
70919633 Antisense, RP_050713_01_G03, Mouse strain C57BL/6J (56 days, male) 0.2

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