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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
197.9
nTPM
Monaco:
552.5
nTPM
Schmiedel:
1005.5
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
197.9
HPA sample
nTPM
gdT-cell nTPM: 42.0
Samples: 6
Max nTPM: 52.2
Min nTPM: 30.3
P10809_1007
34.1
P10809_1022
39.0
P10809_1041
45.4
P10809_1060
50.8
P10809_1077
30.3
P10809_1098
52.2
MAIT T-cell nTPM: 116.6
Samples: 6
Max nTPM: 146.2
Min nTPM: 89.0
P10809_1006
102.1
P10809_1024
119.5
P10809_1043
146.2
P10809_1062
141.9
P10809_1083
100.6
P10809_1097
89.0
Memory CD4 T-cell nTPM: 112.7
Samples: 6
Max nTPM: 133.7
Min nTPM: 89.7
P10809_1014
111.2
P10809_1026
124.7
P10809_1045
127.0
P10809_1064
89.7
P10809_1086
89.8
P10809_1113
133.7
Memory CD8 T-cell nTPM: 66.9
Samples: 5
Max nTPM: 79.5
Min nTPM: 51.7
P10809_1012
74.9
P10809_1027
71.7
P10809_1046
79.5
P10809_1065
51.7
P10809_1111
56.5
Naive CD4 T-cell nTPM: 73.1
Samples: 6
Max nTPM: 88.6
Min nTPM: 57.3
P10809_1015
67.6
P10809_1030
73.3
P10809_1049
57.3
P10809_1068
88.6
P10809_1085
68.7
P10809_1112
82.9
Naive CD8 T-cell nTPM: 46.3
Samples: 6
Max nTPM: 59.3
Min nTPM: 36.5
P10809_1016
54.2
P10809_1031
59.3
P10809_1050
42.6
P10809_1069
37.6
P10809_1087
36.5
P10809_1110
47.6
T-reg nTPM: 197.9
Samples: 6
Max nTPM: 263.5
Min nTPM: 163.4
P10809_1018
202.9
P10809_1037
163.4
P10809_1056
198.1
P10809_1075
165.8
P10809_1094
263.5
P10809_1106
193.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
552.5
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 359.0
Samples: 4
Max nTPM: 450.3
Min nTPM: 299.5
RHH5202_R3573
326.6
RHH5230_R3602
450.3
RHH5259_R3631
359.5
RHH5288_R3660
299.5
Effector memory CD8 T-cell nTPM: 263.1
Samples: 4
Max nTPM: 311.1
Min nTPM: 196.3
RHH5203_R3574
244.9
RHH5231_R3603
311.1
RHH5260_R3632
300.1
RHH5289_R3661
196.3
MAIT T-cell nTPM: 414.9
Samples: 4
Max nTPM: 512.5
Min nTPM: 331.3
RHH5233_R3605
512.5
RHH5205_R3576
479.1
RHH5262_R3634
336.6
RHH5297_R3663
331.3
Memory CD4 T-cell TFH nTPM: 408.3
Samples: 4
Max nTPM: 439.7
Min nTPM: 346.8
RHH5300_R3666
346.8
RHH5236_R3608
418.1
RHH5265_R3637
428.6
RHH5208_R3579
439.7
Memory CD4 T-cell Th1 nTPM: 379.2
Samples: 4
Max nTPM: 518.9
Min nTPM: 273.6
RHH5210_R3581
304.8
RHH5302_R3668
273.6
RHH5238_R3610
518.9
RHH5267_R3639
419.3
Memory CD4 T-cell Th1/Th17 nTPM: 519.9
Samples: 4
Max nTPM: 692.3
Min nTPM: 408.1
RHH5303_R3669
408.1
RHH5211_R3582
490.5
RHH5239_R3611
692.3
RHH5268_R3640
488.8
Memory CD4 T-cell Th17 nTPM: 552.5
Samples: 4
Max nTPM: 793.0
Min nTPM: 450.4
RHH5304_R3670
452.3
RHH5212_R3583
450.4
RHH5240_R3612
793.0
RHH5269_R3641
514.4
Memory CD4 T-cell Th2 nTPM: 445.1
Samples: 4
Max nTPM: 511.3
Min nTPM: 378.0
RHH5305_R3671
378.0
RHH5213_R3584
435.6
RHH5241_R3613
455.6
RHH5270_R3642
511.3
Naive CD4 T-cell nTPM: 261.2
Samples: 4
Max nTPM: 318.1
Min nTPM: 203.3
RHH5306_R3672
238.1
RHH5214_R3585
203.3
RHH5242_R3614
285.2
RHH5271_R3643
318.1
Naive CD8 T-cell nTPM: 228.6
Samples: 4
Max nTPM: 319.8
Min nTPM: 149.9
RHH5201_R3572
149.9
RHH5229_R3601
319.8
RHH5258_R3630
223.9
RHH5287_R3659
220.7
Non-Vd2 gdTCR nTPM: 139.8
Samples: 4
Max nTPM: 216.3
Min nTPM: 88.0
RHH5235_R3607
216.3
RHH5264_R3636
134.1
RHH5207_R3578
120.6
RHH5299_R3665
88.0
T-reg nTPM: 384.4
Samples: 4
Max nTPM: 430.3
Min nTPM: 308.9
RHH5301_R3667
308.9
RHH5237_R3609
430.3
RHH5266_R3638
425.6
RHH5209_R3580
372.8
Terminal effector memory CD4 T-cell nTPM: 345.5
Samples: 2
Max nTPM: 404.9
Min nTPM: 286.1
RHH5243_R3615
404.9
RHH5272_R3644
286.1
Terminal effector memory CD8 T-cell nTPM: 171.1
Samples: 4
Max nTPM: 279.8
Min nTPM: 114.2
RHH5232_R3604
279.8
RHH5204_R3575
117.1
RHH5261_R3633
173.1
RHH5296_R3662
114.2
Vd2 gdTCR nTPM: 292.4
Samples: 4
Max nTPM: 415.6
Min nTPM: 188.2
RHH5234_R3606
415.6
RHH5206_R3577
195.7
RHH5263_R3635
369.9
RHH5298_R3664
188.2
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
