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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
76.8
nTPM
Monaco:
243.8
nTPM
Schmiedel:
413.8
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
76.8
HPA sample
nTPM
gdT-cell nTPM: 59.8
Samples: 6
Max nTPM: 91.1
Min nTPM: 40.9
P10809_1007
53.9
P10809_1022
71.0
P10809_1041
91.1
P10809_1060
40.9
P10809_1077
44.7
P10809_1098
57.4
MAIT T-cell nTPM: 62.9
Samples: 6
Max nTPM: 75.2
Min nTPM: 48.0
P10809_1006
75.2
P10809_1024
63.1
P10809_1043
64.3
P10809_1062
58.6
P10809_1083
48.0
P10809_1097
68.3
Memory CD4 T-cell nTPM: 67.1
Samples: 6
Max nTPM: 97.1
Min nTPM: 47.6
P10809_1014
68.9
P10809_1026
77.0
P10809_1045
97.1
P10809_1064
55.4
P10809_1086
56.5
P10809_1113
47.6
Memory CD8 T-cell nTPM: 64.2
Samples: 5
Max nTPM: 84.3
Min nTPM: 46.6
P10809_1012
64.8
P10809_1027
68.2
P10809_1046
84.3
P10809_1065
57.0
P10809_1111
46.6
Naive CD4 T-cell nTPM: 76.8
Samples: 6
Max nTPM: 158.9
Min nTPM: 51.9
P10809_1015
51.9
P10809_1030
77.7
P10809_1049
158.9
P10809_1068
62.6
P10809_1085
56.8
P10809_1112
53.1
Naive CD8 T-cell nTPM: 55.7
Samples: 6
Max nTPM: 78.4
Min nTPM: 40.7
P10809_1016
46.6
P10809_1031
74.6
P10809_1050
78.4
P10809_1069
52.3
P10809_1087
41.5
P10809_1110
40.7
T-reg nTPM: 57.8
Samples: 6
Max nTPM: 89.1
Min nTPM: 35.7
P10809_1018
47.7
P10809_1037
68.0
P10809_1056
89.1
P10809_1075
56.7
P10809_1094
35.7
P10809_1106
49.4
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
243.8
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 198.8
Samples: 4
Max nTPM: 284.6
Min nTPM: 123.7
RHH5202_R3573
147.7
RHH5230_R3602
239.0
RHH5259_R3631
284.6
RHH5288_R3660
123.7
Effector memory CD8 T-cell nTPM: 192.3
Samples: 4
Max nTPM: 259.4
Min nTPM: 152.7
RHH5203_R3574
159.2
RHH5231_R3603
197.9
RHH5260_R3632
259.4
RHH5289_R3661
152.7
MAIT T-cell nTPM: 162.5
Samples: 4
Max nTPM: 195.9
Min nTPM: 137.4
RHH5233_R3605
138.9
RHH5205_R3576
177.7
RHH5262_R3634
195.9
RHH5297_R3663
137.4
Memory CD4 T-cell TFH nTPM: 173.1
Samples: 4
Max nTPM: 280.4
Min nTPM: 110.8
RHH5300_R3666
143.7
RHH5236_R3608
280.4
RHH5265_R3637
157.4
RHH5208_R3579
110.8
Memory CD4 T-cell Th1 nTPM: 243.8
Samples: 4
Max nTPM: 351.6
Min nTPM: 152.9
RHH5210_R3581
186.7
RHH5302_R3668
152.9
RHH5238_R3610
351.6
RHH5267_R3639
283.9
Memory CD4 T-cell Th1/Th17 nTPM: 213.2
Samples: 4
Max nTPM: 264.8
Min nTPM: 123.9
RHH5303_R3669
123.9
RHH5211_R3582
204.1
RHH5239_R3611
264.8
RHH5268_R3640
260.1
Memory CD4 T-cell Th17 nTPM: 219.3
Samples: 4
Max nTPM: 284.7
Min nTPM: 153.5
RHH5304_R3670
153.5
RHH5212_R3583
247.6
RHH5240_R3612
191.4
RHH5269_R3641
284.7
Memory CD4 T-cell Th2 nTPM: 220.4
Samples: 4
Max nTPM: 281.0
Min nTPM: 173.3
RHH5305_R3671
173.3
RHH5213_R3584
238.6
RHH5241_R3613
188.5
RHH5270_R3642
281.0
Naive CD4 T-cell nTPM: 205.7
Samples: 4
Max nTPM: 219.4
Min nTPM: 191.3
RHH5306_R3672
191.3
RHH5214_R3585
206.3
RHH5242_R3614
205.8
RHH5271_R3643
219.4
Naive CD8 T-cell nTPM: 233.0
Samples: 4
Max nTPM: 437.0
Min nTPM: 116.7
RHH5201_R3572
116.7
RHH5229_R3601
437.0
RHH5258_R3630
167.8
RHH5287_R3659
210.5
Non-Vd2 gdTCR nTPM: 160.5
Samples: 4
Max nTPM: 201.5
Min nTPM: 138.9
RHH5235_R3607
201.5
RHH5264_R3636
140.2
RHH5207_R3578
138.9
RHH5299_R3665
161.2
T-reg nTPM: 201.5
Samples: 4
Max nTPM: 296.2
Min nTPM: 149.8
RHH5301_R3667
149.8
RHH5237_R3609
296.2
RHH5266_R3638
200.5
RHH5209_R3580
159.5
Terminal effector memory CD4 T-cell nTPM: 192.8
Samples: 2
Max nTPM: 232.7
Min nTPM: 152.9
RHH5243_R3615
232.7
RHH5272_R3644
152.9
Terminal effector memory CD8 T-cell nTPM: 170.5
Samples: 4
Max nTPM: 261.3
Min nTPM: 116.4
RHH5232_R3604
168.5
RHH5204_R3575
116.4
RHH5261_R3633
261.3
RHH5296_R3662
135.9
Vd2 gdTCR nTPM: 174.6
Samples: 4
Max nTPM: 203.4
Min nTPM: 151.4
RHH5234_R3606
172.3
RHH5206_R3577
151.4
RHH5263_R3635
203.4
RHH5298_R3664
171.2
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
