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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
30.6
nTPM
Monaco:
63.8
nTPM
Schmiedel:
108.1
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
30.6
HPA sample
nTPM
gdT-cell nTPM: 23.5
Samples: 6
Max nTPM: 31.4
Min nTPM: 15.2
P10809_1007
20.3
P10809_1022
21.9
P10809_1041
31.4
P10809_1060
15.2
P10809_1077
26.1
P10809_1098
26.3
MAIT T-cell nTPM: 23.2
Samples: 6
Max nTPM: 35.2
Min nTPM: 17.8
P10809_1006
23.2
P10809_1024
20.0
P10809_1043
23.4
P10809_1062
19.4
P10809_1083
17.8
P10809_1097
35.2
Memory CD4 T-cell nTPM: 26.4
Samples: 6
Max nTPM: 37.9
Min nTPM: 9.3
P10809_1014
24.9
P10809_1026
32.7
P10809_1045
37.9
P10809_1064
34.8
P10809_1086
18.6
P10809_1113
9.3
Memory CD8 T-cell nTPM: 26.5
Samples: 5
Max nTPM: 40.1
Min nTPM: 10.3
P10809_1012
25.5
P10809_1027
10.3
P10809_1046
40.1
P10809_1065
27.7
P10809_1111
29.1
Naive CD4 T-cell nTPM: 29.9
Samples: 6
Max nTPM: 38.1
Min nTPM: 21.6
P10809_1015
23.3
P10809_1030
31.1
P10809_1049
38.1
P10809_1068
31.8
P10809_1085
33.3
P10809_1112
21.6
Naive CD8 T-cell nTPM: 24.7
Samples: 6
Max nTPM: 35.1
Min nTPM: 10.9
P10809_1016
19.7
P10809_1031
30.1
P10809_1050
24.6
P10809_1069
35.1
P10809_1087
10.9
P10809_1110
27.9
T-reg nTPM: 30.6
Samples: 6
Max nTPM: 46.6
Min nTPM: 17.1
P10809_1018
21.6
P10809_1037
38.6
P10809_1056
46.6
P10809_1075
35.2
P10809_1094
17.1
P10809_1106
24.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
63.8
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 47.8
Samples: 4
Max nTPM: 78.7
Min nTPM: 23.4
RHH5202_R3573
35.3
RHH5230_R3602
78.7
RHH5259_R3631
53.8
RHH5288_R3660
23.4
Effector memory CD8 T-cell nTPM: 49.9
Samples: 4
Max nTPM: 68.6
Min nTPM: 32.6
RHH5203_R3574
37.2
RHH5231_R3603
61.3
RHH5260_R3632
68.6
RHH5289_R3661
32.6
MAIT T-cell nTPM: 47.3
Samples: 4
Max nTPM: 60.9
Min nTPM: 31.4
RHH5233_R3605
31.4
RHH5205_R3576
59.8
RHH5262_R3634
60.9
RHH5297_R3663
37.2
Memory CD4 T-cell TFH nTPM: 49.3
Samples: 4
Max nTPM: 89.8
Min nTPM: 18.3
RHH5300_R3666
58.5
RHH5236_R3608
89.8
RHH5265_R3637
30.4
RHH5208_R3579
18.3
Memory CD4 T-cell Th1 nTPM: 54.6
Samples: 4
Max nTPM: 77.5
Min nTPM: 34.8
RHH5210_R3581
39.2
RHH5302_R3668
34.8
RHH5238_R3610
66.8
RHH5267_R3639
77.5
Memory CD4 T-cell Th1/Th17 nTPM: 50.1
Samples: 4
Max nTPM: 65.1
Min nTPM: 28.7
RHH5303_R3669
28.7
RHH5211_R3582
63.4
RHH5239_R3611
43.3
RHH5268_R3640
65.1
Memory CD4 T-cell Th17 nTPM: 46.8
Samples: 4
Max nTPM: 61.7
Min nTPM: 32.8
RHH5304_R3670
35.6
RHH5212_R3583
61.7
RHH5240_R3612
32.8
RHH5269_R3641
57.1
Memory CD4 T-cell Th2 nTPM: 50.6
Samples: 4
Max nTPM: 72.2
Min nTPM: 27.9
RHH5305_R3671
44.9
RHH5213_R3584
57.4
RHH5241_R3613
27.9
RHH5270_R3642
72.2
Naive CD4 T-cell nTPM: 61.9
Samples: 4
Max nTPM: 66.6
Min nTPM: 54.9
RHH5306_R3672
66.6
RHH5214_R3585
65.6
RHH5242_R3614
54.9
RHH5271_R3643
60.4
Naive CD8 T-cell nTPM: 48.2
Samples: 4
Max nTPM: 56.7
Min nTPM: 31.5
RHH5201_R3572
31.5
RHH5229_R3601
56.7
RHH5258_R3630
55.8
RHH5287_R3659
48.8
Non-Vd2 gdTCR nTPM: 48.6
Samples: 4
Max nTPM: 58.8
Min nTPM: 37.6
RHH5235_R3607
58.8
RHH5264_R3636
37.6
RHH5207_R3578
39.7
RHH5299_R3665
58.1
T-reg nTPM: 63.8
Samples: 4
Max nTPM: 83.0
Min nTPM: 47.8
RHH5301_R3667
47.8
RHH5237_R3609
83.0
RHH5266_R3638
58.5
RHH5209_R3580
65.8
Terminal effector memory CD4 T-cell nTPM: 52.4
Samples: 2
Max nTPM: 68.2
Min nTPM: 36.6
RHH5243_R3615
68.2
RHH5272_R3644
36.6
Terminal effector memory CD8 T-cell nTPM: 45.0
Samples: 4
Max nTPM: 68.5
Min nTPM: 27.2
RHH5232_R3604
47.1
RHH5204_R3575
37.1
RHH5261_R3633
68.5
RHH5296_R3662
27.2
Vd2 gdTCR nTPM: 57.0
Samples: 4
Max nTPM: 70.9
Min nTPM: 42.1
RHH5234_R3606
70.9
RHH5206_R3577
42.1
RHH5263_R3635
69.0
RHH5298_R3664
46.0
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
