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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
515.1
nTPM
Monaco:
116.9
nTPM
Schmiedel:
22.2
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
515.1
HPA sample
nTPM
gdT-cell nTPM: 447.0
Samples: 6
Max nTPM: 531.3
Min nTPM: 364.8
P10809_1007
412.6
P10809_1022
495.7
P10809_1041
531.3
P10809_1060
364.8
P10809_1077
457.6
P10809_1098
420.0
MAIT T-cell nTPM: 505.7
Samples: 6
Max nTPM: 612.8
Min nTPM: 337.4
P10809_1006
337.4
P10809_1024
612.8
P10809_1043
589.6
P10809_1062
491.3
P10809_1083
443.9
P10809_1097
559.3
Memory CD4 T-cell nTPM: 500.1
Samples: 6
Max nTPM: 612.3
Min nTPM: 349.6
P10809_1014
349.6
P10809_1026
612.3
P10809_1045
580.0
P10809_1064
492.0
P10809_1086
487.9
P10809_1113
478.7
Memory CD8 T-cell nTPM: 474.6
Samples: 5
Max nTPM: 563.2
Min nTPM: 341.6
P10809_1012
341.6
P10809_1027
534.6
P10809_1046
563.2
P10809_1065
475.5
P10809_1111
458.0
Naive CD4 T-cell nTPM: 375.9
Samples: 6
Max nTPM: 474.8
Min nTPM: 259.9
P10809_1015
259.9
P10809_1030
474.8
P10809_1049
444.9
P10809_1068
392.9
P10809_1085
346.2
P10809_1112
336.6
Naive CD8 T-cell nTPM: 407.2
Samples: 6
Max nTPM: 481.5
Min nTPM: 314.7
P10809_1016
323.8
P10809_1031
481.5
P10809_1050
429.6
P10809_1069
457.4
P10809_1087
436.3
P10809_1110
314.7
T-reg nTPM: 515.1
Samples: 6
Max nTPM: 810.8
Min nTPM: 326.1
P10809_1018
326.1
P10809_1037
470.4
P10809_1056
810.8
P10809_1075
545.2
P10809_1094
479.8
P10809_1106
458.2
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
116.9
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 74.9
Samples: 4
Max nTPM: 112.8
Min nTPM: 27.4
RHH5202_R3573
27.4
RHH5230_R3602
94.6
RHH5259_R3631
112.8
RHH5288_R3660
64.6
Effector memory CD8 T-cell nTPM: 49.6
Samples: 4
Max nTPM: 94.0
Min nTPM: 31.4
RHH5203_R3574
31.4
RHH5231_R3603
41.0
RHH5260_R3632
94.0
RHH5289_R3661
31.9
MAIT T-cell nTPM: 72.8
Samples: 4
Max nTPM: 82.6
Min nTPM: 63.8
RHH5233_R3605
66.5
RHH5205_R3576
78.3
RHH5262_R3634
82.6
RHH5297_R3663
63.8
Memory CD4 T-cell TFH nTPM: 53.6
Samples: 4
Max nTPM: 78.9
Min nTPM: 41.9
RHH5300_R3666
47.8
RHH5236_R3608
78.9
RHH5265_R3637
45.8
RHH5208_R3579
41.9
Memory CD4 T-cell Th1 nTPM: 87.0
Samples: 4
Max nTPM: 126.2
Min nTPM: 32.6
RHH5210_R3581
32.6
RHH5302_R3668
88.3
RHH5238_R3610
126.2
RHH5267_R3639
100.8
Memory CD4 T-cell Th1/Th17 nTPM: 75.6
Samples: 4
Max nTPM: 105.9
Min nTPM: 60.8
RHH5303_R3669
63.9
RHH5211_R3582
60.8
RHH5239_R3611
71.9
RHH5268_R3640
105.9
Memory CD4 T-cell Th17 nTPM: 82.8
Samples: 4
Max nTPM: 108.1
Min nTPM: 52.3
RHH5304_R3670
93.2
RHH5212_R3583
52.3
RHH5240_R3612
108.1
RHH5269_R3641
77.6
Memory CD4 T-cell Th2 nTPM: 74.7
Samples: 4
Max nTPM: 120.0
Min nTPM: 50.5
RHH5305_R3671
120.0
RHH5213_R3584
60.3
RHH5241_R3613
50.5
RHH5270_R3642
68.1
Naive CD4 T-cell nTPM: 68.8
Samples: 4
Max nTPM: 82.3
Min nTPM: 40.4
RHH5306_R3672
82.3
RHH5214_R3585
76.2
RHH5242_R3614
40.4
RHH5271_R3643
76.3
Naive CD8 T-cell nTPM: 52.6
Samples: 4
Max nTPM: 88.1
Min nTPM: 24.0
RHH5201_R3572
24.0
RHH5229_R3601
88.1
RHH5258_R3630
39.0
RHH5287_R3659
59.4
Non-Vd2 gdTCR nTPM: 68.3
Samples: 4
Max nTPM: 94.5
Min nTPM: 46.5
RHH5235_R3607
94.5
RHH5264_R3636
59.5
RHH5207_R3578
46.5
RHH5299_R3665
72.8
T-reg nTPM: 59.9
Samples: 4
Max nTPM: 80.7
Min nTPM: 44.3
RHH5301_R3667
80.7
RHH5237_R3609
44.3
RHH5266_R3638
59.8
RHH5209_R3580
54.8
Terminal effector memory CD4 T-cell nTPM: 65.1
Samples: 2
Max nTPM: 75.0
Min nTPM: 55.2
RHH5243_R3615
75.0
RHH5272_R3644
55.2
Terminal effector memory CD8 T-cell nTPM: 83.9
Samples: 4
Max nTPM: 119.3
Min nTPM: 45.2
RHH5232_R3604
45.2
RHH5204_R3575
102.9
RHH5261_R3633
119.3
RHH5296_R3662
68.2
Vd2 gdTCR nTPM: 116.9
Samples: 4
Max nTPM: 199.2
Min nTPM: 57.7
RHH5234_R3606
57.7
RHH5206_R3577
199.2
RHH5263_R3635
122.3
RHH5298_R3664
88.3
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
