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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
1041.7
nTPM
Monaco:
1973.9
nTPM
Schmiedel:
353.4
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
1041.7
HPA sample
nTPM
gdT-cell nTPM: 932.8
Samples: 6
Max nTPM: 1242.4
Min nTPM: 769.5
P10809_1007
776.2
P10809_1022
1242.4
P10809_1041
1062.9
P10809_1060
769.5
P10809_1077
883.3
P10809_1098
862.3
MAIT T-cell nTPM: 627.2
Samples: 6
Max nTPM: 752.5
Min nTPM: 514.0
P10809_1006
514.0
P10809_1024
752.5
P10809_1043
697.7
P10809_1062
531.3
P10809_1083
591.3
P10809_1097
676.4
Memory CD4 T-cell nTPM: 722.8
Samples: 6
Max nTPM: 818.8
Min nTPM: 628.5
P10809_1014
628.5
P10809_1026
712.2
P10809_1045
818.8
P10809_1064
744.0
P10809_1086
766.3
P10809_1113
667.0
Memory CD8 T-cell nTPM: 913.6
Samples: 5
Max nTPM: 1069.9
Min nTPM: 737.1
P10809_1012
737.1
P10809_1027
1069.9
P10809_1046
973.8
P10809_1065
964.9
P10809_1111
822.5
Naive CD4 T-cell nTPM: 507.2
Samples: 6
Max nTPM: 605.9
Min nTPM: 419.5
P10809_1015
429.7
P10809_1030
537.8
P10809_1049
605.9
P10809_1068
419.5
P10809_1085
591.0
P10809_1112
459.5
Naive CD8 T-cell nTPM: 752.2
Samples: 6
Max nTPM: 967.3
Min nTPM: 475.0
P10809_1016
475.0
P10809_1031
746.9
P10809_1050
806.4
P10809_1069
909.9
P10809_1087
967.3
P10809_1110
607.5
T-reg nTPM: 1041.8
Samples: 6
Max nTPM: 1166.3
Min nTPM: 914.3
P10809_1018
914.3
P10809_1037
1109.4
P10809_1056
1166.3
P10809_1075
943.1
P10809_1094
1044.9
P10809_1106
1072.5
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
1973.9
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 1069.4
Samples: 4
Max nTPM: 1433.4
Min nTPM: 720.1
RHH5202_R3573
1291.0
RHH5230_R3602
833.0
RHH5259_R3631
720.1
RHH5288_R3660
1433.4
Effector memory CD8 T-cell nTPM: 1747.2
Samples: 4
Max nTPM: 2090.4
Min nTPM: 1288.2
RHH5203_R3574
2090.4
RHH5231_R3603
1904.9
RHH5260_R3632
1288.2
RHH5289_R3661
1705.4
MAIT T-cell nTPM: 1125.9
Samples: 4
Max nTPM: 1267.6
Min nTPM: 809.8
RHH5233_R3605
1233.6
RHH5205_R3576
809.8
RHH5262_R3634
1192.4
RHH5297_R3663
1267.6
Memory CD4 T-cell TFH nTPM: 1339.8
Samples: 4
Max nTPM: 1497.5
Min nTPM: 1118.7
RHH5300_R3666
1257.6
RHH5236_R3608
1485.4
RHH5265_R3637
1118.7
RHH5208_R3579
1497.5
Memory CD4 T-cell Th1 nTPM: 1054.1
Samples: 4
Max nTPM: 1478.5
Min nTPM: 731.3
RHH5210_R3581
1062.1
RHH5302_R3668
1478.5
RHH5238_R3610
731.3
RHH5267_R3639
944.6
Memory CD4 T-cell Th1/Th17 nTPM: 1062.8
Samples: 4
Max nTPM: 1485.6
Min nTPM: 513.8
RHH5303_R3669
1485.6
RHH5211_R3582
1401.2
RHH5239_R3611
513.8
RHH5268_R3640
850.7
Memory CD4 T-cell Th17 nTPM: 930.8
Samples: 4
Max nTPM: 1218.3
Min nTPM: 746.9
RHH5304_R3670
952.3
RHH5212_R3583
1218.3
RHH5240_R3612
805.5
RHH5269_R3641
746.9
Memory CD4 T-cell Th2 nTPM: 1225.3
Samples: 4
Max nTPM: 1347.7
Min nTPM: 1107.5
RHH5305_R3671
1269.9
RHH5213_R3584
1176.2
RHH5241_R3613
1347.7
RHH5270_R3642
1107.5
Naive CD4 T-cell nTPM: 815.8
Samples: 4
Max nTPM: 938.6
Min nTPM: 713.4
RHH5306_R3672
863.9
RHH5214_R3585
938.6
RHH5242_R3614
747.2
RHH5271_R3643
713.4
Naive CD8 T-cell nTPM: 798.3
Samples: 4
Max nTPM: 1012.4
Min nTPM: 463.2
RHH5201_R3572
1012.4
RHH5229_R3601
463.2
RHH5258_R3630
917.0
RHH5287_R3659
800.5
Non-Vd2 gdTCR nTPM: 1940.8
Samples: 4
Max nTPM: 2414.1
Min nTPM: 1013.1
RHH5235_R3607
1013.1
RHH5264_R3636
2414.1
RHH5207_R3578
2047.8
RHH5299_R3665
2288.3
T-reg nTPM: 1083.5
Samples: 4
Max nTPM: 1438.6
Min nTPM: 795.6
RHH5301_R3667
1192.0
RHH5237_R3609
1438.6
RHH5266_R3638
795.6
RHH5209_R3580
907.7
Terminal effector memory CD4 T-cell nTPM: 1360.1
Samples: 2
Max nTPM: 1740.7
Min nTPM: 979.4
RHH5243_R3615
979.4
RHH5272_R3644
1740.7
Terminal effector memory CD8 T-cell nTPM: 1974.0
Samples: 4
Max nTPM: 2408.5
Min nTPM: 1429.9
RHH5232_R3604
1887.1
RHH5204_R3575
2408.5
RHH5261_R3633
1429.9
RHH5296_R3662
2170.3
Vd2 gdTCR nTPM: 1510.8
Samples: 4
Max nTPM: 2135.4
Min nTPM: 1121.6
RHH5234_R3606
1294.2
RHH5206_R3577
2135.4
RHH5263_R3635
1121.6
RHH5298_R3664
1492.1
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.