HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: Medium
RNA expressioni
Consensus:62.0 nTPM
HPA Brain:81.5 nTPM
GTEx:62.0 nTPM
FANTOM5:122.2 Scaled Tags Per Million
Pig:98.0 nTPM
Mouse:149.2 nTPM
Allen mouse:6.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA006543
Glial cells High
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 81.5
Sample id Sample description nTPM
Hippocampus
nTPM: 73.0
1898 Male, age 80, left hemisphere 90.3
2529 Female, age 94, left hemisphere 77.8
1911 Female, age 85, right hemisphere 68.5
1855 Male, age 76, left hemisphere 68.0
2621 Female, age 67, right hemisphere 68.0
2148 Female, age 91, left hemisphere 65.5
Dentate gyrus
nTPM: 74.5
1927 Female, age 91, both hemispheres 87.6
2010 Male, age 76, both hemispheres 83.1
2528 Male, age 74, both hemispheres 73.8
2530 Female, age 94, left hemisphere 71.9
2246 Female, age 85, both hemispheres 69.7
2531 Female, age 67, both hemispheres 60.9
Entorhinal gyrus
nTPM: 67.5
1938 Female, age 85, left hemisphere 82.4
2764 Male, age 80, right hemisphere 76.2
1787 Male, age 76, left hemisphere 73.1
2117 Female, age 91, right hemisphere 69.5
2613 Female, age 94, left hemisphere 52.4
2686 Male, age 75, right hemisphere 51.4
Hippocampus, CA1
nTPM: 81.5
2749 Male, age 80, left hemisphere 108.0
1873 Female, age 85, both hemispheres 87.7
2045 Male, age 76, both hemispheres 78.1
2527 Male, age 74, both hemispheres 70.5
2082 Female, age 91, right hemisphere 63.1
Hippocampus, CA2
nTPM: 79.1
1892 Male, age 76, both hemispheres 100.3
1963 Male, age 80, left hemisphere 88.4
2249 Male, age 74, both hemispheres 86.9
1940 Female, age 85, left hemisphere 71.6
2437 Female, age 94, left hemisphere 67.2
2113 Female, age 91, right hemisphere 60.6
Hippocampus, CA3
nTPM: 75.2
2436 Male, age 74, both hemispheres 90.8
1867 Male, age 76, both hemispheres 87.0
2137 Male, age 80, left hemisphere 83.2
1891 Female, age 85, both hemispheres 75.5
2620 Female, age 94, left hemisphere 61.6
2861 Female, age 67, both hemispheres 53.0
Parahippocampal cortex
nTPM: 64.8
1850 Male, age 80, both hemispheres 81.0
1933 Female, age 85, both hemispheres 76.5
1990 Female, age 91, right hemisphere 76.2
2250 Female, age 67, right hemisphere 67.9
2018 Male, age 76, both hemispheres 66.9
2532 Female, age 72, left hemisphere 64.6
2245 Female, age 91, both hemispheres 64.5
2693 Female, age 94, both hemispheres 54.9
2692 Male, age 74, both hemispheres 50.8
2622 Female, age 67, right hemisphere 45.2
Perirhinal gyrus
nTPM: 76.4
1847 Female, age 91, left hemisphere 92.4
1841 Female, age 85, right hemisphere 83.0
1794 Male, age 80, right hemisphere 79.8
2848 Male, age 76, right hemisphere 64.3
2521 Female, age 94, right hemisphere 62.3
Subiculum
nTPM: 70.8
1977 Female, age 85, both hemispheres 83.0
1901 Male, age 80, both hemispheres 78.2
2042 Male, age 76, both hemispheres 69.6
2729 Female, age 91, right hemisphere 65.4
2619 Male, age 74, both hemispheres 65.1
2438 Female, age 94, left hemisphere 63.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 62.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 62.0
Samples: 197

Max nTPM: 171.1
Min nTPM: 24.0
Std nTPM: 18.1
Median nTPM: 59.3
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 171.1
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 140.8
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 140.3
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 121.9
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 104.6
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 101.8
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 101.6
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 98.1
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 97.8
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 91.3
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 87.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 122.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 122.2
FF:10153-102I9 76 years, female 124.1
FF:10169-103B7 60 years, female 120.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 98.0
Pig sample Sample description nTPM
Subiculum
nTPM: 85.2
Samples: 4

Max nTPM: 109.9
Min nTPM: 74.5
Sample A Female 109.9
Sample B Female 81.5
Sample C Male 74.5
Sample D Male 74.9
Dorsal hippocampus
nTPM: 98.0
Samples: 4

Max nTPM: 124.8
Min nTPM: 76.7
Sample A Female 124.8
Sample B Female 97.3
Sample C Male 93.1
Sample D Male 76.7
Entorhinal cortex
nTPM: 85.7
Samples: 4

Max nTPM: 102.8
Min nTPM: 68.6
Sample A Female 89.4
Sample B Female 102.8
Sample C Male 81.9
Sample D Male 68.6
Ventral hippocampus
nTPM: 89.9
Samples: 4

Max nTPM: 101.4
Min nTPM: 70.8
Sample A Female 93.8
Sample B Female 70.8
Sample C Male 101.4
Sample D Male 93.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 149.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 132.4
Samples: 4

Max nTPM: 144.8
Min nTPM: 120.8
Sample A Male 120.8
Sample B Male 128.3
Sample C Female 144.8
Sample D Female 135.8
Hippocampal formation
nTPM: 149.2
Samples: 4

Max nTPM: 161.0
Min nTPM: 136.4
Sample A Male 161.0
Sample B Male 136.4
Sample C Female 151.2
Sample D Female 148.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 6.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.4
69540543 Antisense, RP_050426_01_H12, Mouse strain C57BL/6J (56 days, male) 6.4

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