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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
177.7
nTPM
Monaco:
241.1
nTPM
Schmiedel:
500.5
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
177.7
HPA sample
nTPM
gdT-cell nTPM: 129.4
Samples: 6
Max nTPM: 167.4
Min nTPM: 92.7
P10809_1007
92.7
P10809_1022
147.9
P10809_1041
167.4
P10809_1060
117.0
P10809_1077
110.9
P10809_1098
140.5
MAIT T-cell nTPM: 171.6
Samples: 6
Max nTPM: 214.2
Min nTPM: 137.2
P10809_1006
137.2
P10809_1024
214.2
P10809_1043
162.7
P10809_1062
182.5
P10809_1083
146.4
P10809_1097
186.3
Memory CD4 T-cell nTPM: 144.9
Samples: 6
Max nTPM: 153.5
Min nTPM: 127.7
P10809_1014
134.2
P10809_1026
152.4
P10809_1045
153.5
P10809_1064
148.7
P10809_1086
127.7
P10809_1113
152.7
Memory CD8 T-cell nTPM: 139.0
Samples: 5
Max nTPM: 164.1
Min nTPM: 123.7
P10809_1012
123.7
P10809_1027
144.6
P10809_1046
164.1
P10809_1065
125.7
P10809_1111
136.8
Naive CD4 T-cell nTPM: 177.7
Samples: 6
Max nTPM: 210.7
Min nTPM: 142.9
P10809_1015
142.9
P10809_1030
147.8
P10809_1049
204.3
P10809_1068
210.7
P10809_1085
169.7
P10809_1112
190.9
Naive CD8 T-cell nTPM: 157.2
Samples: 6
Max nTPM: 175.7
Min nTPM: 131.2
P10809_1016
167.7
P10809_1031
144.5
P10809_1050
149.6
P10809_1069
174.5
P10809_1087
131.2
P10809_1110
175.7
T-reg nTPM: 164.8
Samples: 6
Max nTPM: 206.2
Min nTPM: 127.0
P10809_1018
127.0
P10809_1037
171.6
P10809_1056
206.2
P10809_1075
149.7
P10809_1094
158.9
P10809_1106
175.5
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
241.1
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 190.7
Samples: 4
Max nTPM: 212.0
Min nTPM: 166.1
RHH5202_R3573
166.1
RHH5230_R3602
212.0
RHH5259_R3631
194.4
RHH5288_R3660
190.4
Effector memory CD8 T-cell nTPM: 236.6
Samples: 4
Max nTPM: 274.4
Min nTPM: 196.2
RHH5203_R3574
261.9
RHH5231_R3603
196.2
RHH5260_R3632
213.9
RHH5289_R3661
274.4
MAIT T-cell nTPM: 225.6
Samples: 4
Max nTPM: 293.4
Min nTPM: 178.8
RHH5233_R3605
216.0
RHH5205_R3576
293.4
RHH5262_R3634
214.1
RHH5297_R3663
178.8
Memory CD4 T-cell TFH nTPM: 205.3
Samples: 4
Max nTPM: 231.9
Min nTPM: 176.7
RHH5300_R3666
176.7
RHH5236_R3608
192.7
RHH5265_R3637
219.7
RHH5208_R3579
231.9
Memory CD4 T-cell Th1 nTPM: 188.2
Samples: 4
Max nTPM: 219.2
Min nTPM: 134.2
RHH5210_R3581
212.0
RHH5302_R3668
187.2
RHH5238_R3610
134.2
RHH5267_R3639
219.2
Memory CD4 T-cell Th1/Th17 nTPM: 197.9
Samples: 4
Max nTPM: 230.8
Min nTPM: 163.9
RHH5303_R3669
196.3
RHH5211_R3582
230.8
RHH5239_R3611
163.9
RHH5268_R3640
200.6
Memory CD4 T-cell Th17 nTPM: 215.5
Samples: 4
Max nTPM: 237.1
Min nTPM: 204.5
RHH5304_R3670
204.5
RHH5212_R3583
237.1
RHH5240_R3612
211.7
RHH5269_R3641
208.8
Memory CD4 T-cell Th2 nTPM: 209.7
Samples: 4
Max nTPM: 247.1
Min nTPM: 152.3
RHH5305_R3671
224.1
RHH5213_R3584
247.1
RHH5241_R3613
152.3
RHH5270_R3642
215.3
Naive CD4 T-cell nTPM: 241.0
Samples: 4
Max nTPM: 290.7
Min nTPM: 179.3
RHH5306_R3672
242.1
RHH5214_R3585
290.7
RHH5242_R3614
179.3
RHH5271_R3643
252.0
Naive CD8 T-cell nTPM: 241.1
Samples: 4
Max nTPM: 296.0
Min nTPM: 150.7
RHH5201_R3572
296.0
RHH5229_R3601
150.7
RHH5258_R3630
251.2
RHH5287_R3659
266.6
Non-Vd2 gdTCR nTPM: 191.5
Samples: 4
Max nTPM: 232.0
Min nTPM: 145.0
RHH5235_R3607
161.4
RHH5264_R3636
227.4
RHH5207_R3578
232.0
RHH5299_R3665
145.0
T-reg nTPM: 201.4
Samples: 4
Max nTPM: 247.3
Min nTPM: 169.9
RHH5301_R3667
175.4
RHH5237_R3609
169.9
RHH5266_R3638
247.3
RHH5209_R3580
213.0
Terminal effector memory CD4 T-cell nTPM: 230.4
Samples: 2
Max nTPM: 246.8
Min nTPM: 213.9
RHH5243_R3615
213.9
RHH5272_R3644
246.8
Terminal effector memory CD8 T-cell nTPM: 183.8
Samples: 4
Max nTPM: 200.5
Min nTPM: 163.2
RHH5232_R3604
179.0
RHH5204_R3575
163.2
RHH5261_R3633
200.5
RHH5296_R3662
192.4
Vd2 gdTCR nTPM: 190.4
Samples: 4
Max nTPM: 239.4
Min nTPM: 137.1
RHH5234_R3606
184.9
RHH5206_R3577
200.1
RHH5263_R3635
239.4
RHH5298_R3664
137.1
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.