HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Not detected
RNA expressioni
Consensus:13.9 nTPM
HPA Brain:9.7 nTPM
GTEx:13.9 nTPM
FANTOM5:16.6 Scaled Tags Per Million
Pig:15.2 nTPM
Mouse:19.3 nTPM
Allen mouse:0.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA034688
Glial cells Low
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 9.7
Sample id Sample description nTPM
Hippocampus
nTPM: 8.9
1898 Male, age 80, left hemisphere 10.1
2529 Female, age 94, left hemisphere 9.6
2621 Female, age 67, right hemisphere 9.5
1855 Male, age 76, left hemisphere 8.3
1911 Female, age 85, right hemisphere 8.0
2148 Female, age 91, left hemisphere 7.5
Dentate gyrus
nTPM: 8.3
1927 Female, age 91, both hemispheres 9.0
2246 Female, age 85, both hemispheres 8.6
2010 Male, age 76, both hemispheres 8.5
2530 Female, age 94, left hemisphere 8.5
2531 Female, age 67, both hemispheres 7.8
2528 Male, age 74, both hemispheres 7.4
Entorhinal gyrus
nTPM: 9.0
1938 Female, age 85, left hemisphere 10.4
1787 Male, age 76, left hemisphere 9.4
2686 Male, age 75, right hemisphere 9.4
2764 Male, age 80, right hemisphere 8.9
2613 Female, age 94, left hemisphere 8.1
2117 Female, age 91, right hemisphere 8.0
Hippocampus, CA1
nTPM: 8.7
2749 Male, age 80, left hemisphere 11.1
2527 Male, age 74, both hemispheres 9.1
1873 Female, age 85, both hemispheres 8.3
2082 Female, age 91, right hemisphere 7.8
2045 Male, age 76, both hemispheres 7.0
Hippocampus, CA2
nTPM: 9.3
1892 Male, age 76, both hemispheres 10.9
2249 Male, age 74, both hemispheres 10.1
1940 Female, age 85, left hemisphere 9.5
1963 Male, age 80, left hemisphere 9.3
2437 Female, age 94, left hemisphere 8.0
2113 Female, age 91, right hemisphere 7.9
Hippocampus, CA3
nTPM: 9.0
2137 Male, age 80, left hemisphere 10.4
1867 Male, age 76, both hemispheres 10.3
2436 Male, age 74, both hemispheres 10.2
1891 Female, age 85, both hemispheres 9.3
2861 Female, age 67, both hemispheres 7.2
2620 Female, age 94, left hemisphere 6.8
Parahippocampal cortex
nTPM: 9.3
1850 Male, age 80, both hemispheres 11.8
2693 Female, age 94, both hemispheres 10.5
2250 Female, age 67, right hemisphere 9.7
2532 Female, age 72, left hemisphere 9.4
2692 Male, age 74, both hemispheres 9.4
2245 Female, age 91, both hemispheres 9.3
1933 Female, age 85, both hemispheres 9.0
1990 Female, age 91, right hemisphere 8.7
2018 Male, age 76, both hemispheres 7.6
2622 Female, age 67, right hemisphere 7.6
Perirhinal gyrus
nTPM: 9.7
1841 Female, age 85, right hemisphere 10.6
1847 Female, age 91, left hemisphere 9.9
2521 Female, age 94, right hemisphere 9.9
1794 Male, age 80, right hemisphere 9.8
2848 Male, age 76, right hemisphere 8.1
Subiculum
nTPM: 9.2
2438 Female, age 94, left hemisphere 11.3
1901 Male, age 80, both hemispheres 10.0
2619 Male, age 74, both hemispheres 9.9
1977 Female, age 85, both hemispheres 9.8
2042 Male, age 76, both hemispheres 7.1
2729 Female, age 91, right hemisphere 6.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 13.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 13.9
Samples: 197

Max nTPM: 29.1
Min nTPM: 7.6
Std nTPM: 3.5
Median nTPM: 13.1
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 29.1
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 27.6
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 24.0
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 23.4
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 23.2
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 21.3
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 21.3
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 20.8
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 20.6
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 20.6
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 20.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 16.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 16.6
FF:10153-102I9 76 years, female 18.6
FF:10169-103B7 60 years, female 14.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 15.2
Pig sample Sample description nTPM
Subiculum
nTPM: 12.4
Samples: 4

Max nTPM: 17.1
Min nTPM: 10.5
Sample A Female 17.1
Sample B Female 10.8
Sample C Male 10.5
Sample D Male 11.3
Dorsal hippocampus
nTPM: 15.2
Samples: 4

Max nTPM: 19.0
Min nTPM: 9.1
Sample A Female 19.0
Sample B Female 16.5
Sample C Male 16.1
Sample D Male 9.1
Entorhinal cortex
nTPM: 12.5
Samples: 4

Max nTPM: 16.4
Min nTPM: 8.8
Sample A Female 11.8
Sample B Female 16.4
Sample C Male 12.9
Sample D Male 8.8
Ventral hippocampus
nTPM: 14.5
Samples: 4

Max nTPM: 16.6
Min nTPM: 10.9
Sample A Female 14.7
Sample B Female 10.9
Sample C Male 15.6
Sample D Male 16.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 19.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 19.3
Samples: 4

Max nTPM: 19.7
Min nTPM: 18.2
Sample A Male 18.2
Sample B Male 19.7
Sample C Female 19.7
Sample D Female 19.6
Hippocampal formation
nTPM: 19.3
Samples: 4

Max nTPM: 22.5
Min nTPM: 17.6
Sample A Male 22.5
Sample B Male 18.1
Sample C Female 19.0
Sample D Female 17.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.5
70431235 Antisense, RP_050614_02_D10, Mouse strain C57BL/6J (56 days, male) 0.5

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