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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
16.8
nTPM
Monaco:
13.3
nTPM
Schmiedel:
52.8
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
16.8
HPA sample
nTPM
gdT-cell nTPM: 7.9
Samples: 6
Max nTPM: 10.5
Min nTPM: 5.0
P10809_1007
5.0
P10809_1022
10.2
P10809_1041
8.2
P10809_1060
10.5
P10809_1077
6.7
P10809_1098
6.5
MAIT T-cell nTPM: 14.1
Samples: 6
Max nTPM: 19.9
Min nTPM: 5.0
P10809_1006
5.0
P10809_1024
19.9
P10809_1043
15.2
P10809_1062
14.6
P10809_1083
16.2
P10809_1097
13.4
Memory CD4 T-cell nTPM: 13.2
Samples: 6
Max nTPM: 17.2
Min nTPM: 8.5
P10809_1014
8.5
P10809_1026
14.4
P10809_1045
17.2
P10809_1064
14.4
P10809_1086
14.0
P10809_1113
10.8
Memory CD8 T-cell nTPM: 12.1
Samples: 5
Max nTPM: 16.7
Min nTPM: 9.6
P10809_1012
10.8
P10809_1027
9.6
P10809_1046
13.5
P10809_1065
16.7
P10809_1111
10.0
Naive CD4 T-cell nTPM: 16.8
Samples: 6
Max nTPM: 21.8
Min nTPM: 9.0
P10809_1015
9.0
P10809_1030
19.9
P10809_1049
20.0
P10809_1068
18.1
P10809_1085
21.8
P10809_1112
12.1
Naive CD8 T-cell nTPM: 11.5
Samples: 6
Max nTPM: 16.5
Min nTPM: 6.9
P10809_1016
6.9
P10809_1031
16.5
P10809_1050
11.6
P10809_1069
13.6
P10809_1087
13.0
P10809_1110
7.5
T-reg nTPM: 16.3
Samples: 6
Max nTPM: 22.6
Min nTPM: 8.0
P10809_1018
10.7
P10809_1037
22.6
P10809_1056
16.4
P10809_1075
21.2
P10809_1094
8.0
P10809_1106
19.1
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
13.3
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 10.1
Samples: 4
Max nTPM: 13.7
Min nTPM: 5.9
RHH5202_R3573
11.0
RHH5230_R3602
13.7
RHH5259_R3631
5.9
RHH5288_R3660
9.7
Effector memory CD8 T-cell nTPM: 12.7
Samples: 4
Max nTPM: 19.6
Min nTPM: 8.7
RHH5203_R3574
8.7
RHH5231_R3603
19.6
RHH5260_R3632
11.1
RHH5289_R3661
11.4
MAIT T-cell nTPM: 10.9
Samples: 4
Max nTPM: 12.4
Min nTPM: 9.2
RHH5233_R3605
11.8
RHH5205_R3576
10.1
RHH5262_R3634
9.2
RHH5297_R3663
12.4
Memory CD4 T-cell TFH nTPM: 9.2
Samples: 4
Max nTPM: 12.4
Min nTPM: 4.5
RHH5300_R3666
11.5
RHH5236_R3608
8.4
RHH5265_R3637
4.5
RHH5208_R3579
12.4
Memory CD4 T-cell Th1 nTPM: 7.0
Samples: 4
Max nTPM: 10.3
Min nTPM: 5.2
RHH5210_R3581
5.2
RHH5302_R3668
10.3
RHH5238_R3610
6.4
RHH5267_R3639
6.2
Memory CD4 T-cell Th1/Th17 nTPM: 12.0
Samples: 4
Max nTPM: 18.2
Min nTPM: 6.5
RHH5303_R3669
9.1
RHH5211_R3582
14.1
RHH5239_R3611
6.5
RHH5268_R3640
18.2
Memory CD4 T-cell Th17 nTPM: 9.5
Samples: 4
Max nTPM: 12.3
Min nTPM: 8.0
RHH5304_R3670
8.0
RHH5212_R3583
8.9
RHH5240_R3612
8.9
RHH5269_R3641
12.3
Memory CD4 T-cell Th2 nTPM: 13.3
Samples: 4
Max nTPM: 15.5
Min nTPM: 10.9
RHH5305_R3671
10.9
RHH5213_R3584
14.9
RHH5241_R3613
11.8
RHH5270_R3642
15.5
Naive CD4 T-cell nTPM: 12.0
Samples: 4
Max nTPM: 15.3
Min nTPM: 7.6
RHH5306_R3672
15.1
RHH5214_R3585
15.3
RHH5242_R3614
10.1
RHH5271_R3643
7.6
Naive CD8 T-cell nTPM: 10.4
Samples: 4
Max nTPM: 14.1
Min nTPM: 4.9
RHH5201_R3572
14.1
RHH5229_R3601
4.9
RHH5258_R3630
12.1
RHH5287_R3659
10.3
Non-Vd2 gdTCR nTPM: 9.6
Samples: 4
Max nTPM: 13.5
Min nTPM: 1.5
RHH5235_R3607
1.5
RHH5264_R3636
11.7
RHH5207_R3578
11.5
RHH5299_R3665
13.5
T-reg nTPM: 10.8
Samples: 4
Max nTPM: 14.9
Min nTPM: 7.7
RHH5301_R3667
10.1
RHH5237_R3609
10.3
RHH5266_R3638
7.7
RHH5209_R3580
14.9
Terminal effector memory CD4 T-cell nTPM: 6.6
Samples: 2
Max nTPM: 8.2
Min nTPM: 4.9
RHH5243_R3615
4.9
RHH5272_R3644
8.2
Terminal effector memory CD8 T-cell nTPM: 8.1
Samples: 4
Max nTPM: 10.7
Min nTPM: 6.7
RHH5232_R3604
7.7
RHH5204_R3575
6.7
RHH5261_R3633
7.4
RHH5296_R3662
10.7
Vd2 gdTCR nTPM: 9.5
Samples: 4
Max nTPM: 13.2
Min nTPM: 7.1
RHH5234_R3606
9.4
RHH5206_R3577
13.2
RHH5263_R3635
7.1
RHH5298_R3664
8.2
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
