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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
27.3
nTPM
Monaco:
27.9
nTPM
Schmiedel:
10.5
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
27.3
HPA sample
nTPM
gdT-cell nTPM: 9.3
Samples: 6
Max nTPM: 11.8
Min nTPM: 5.8
P10809_1007
5.8
P10809_1022
11.8
P10809_1041
6.6
P10809_1060
10.9
P10809_1077
10.2
P10809_1098
10.7
MAIT T-cell nTPM: 7.0
Samples: 6
Max nTPM: 11.5
Min nTPM: 5.7
P10809_1006
6.0
P10809_1024
11.5
P10809_1043
6.2
P10809_1062
6.3
P10809_1083
5.7
P10809_1097
6.0
Memory CD4 T-cell nTPM: 9.7
Samples: 6
Max nTPM: 13.0
Min nTPM: 6.6
P10809_1014
6.6
P10809_1026
11.1
P10809_1045
9.9
P10809_1064
7.0
P10809_1086
13.0
P10809_1113
10.6
Memory CD8 T-cell nTPM: 10.2
Samples: 5
Max nTPM: 13.2
Min nTPM: 6.6
P10809_1012
6.6
P10809_1027
13.2
P10809_1046
9.8
P10809_1065
10.3
P10809_1111
11.2
Naive CD4 T-cell nTPM: 6.9
Samples: 6
Max nTPM: 9.7
Min nTPM: 4.0
P10809_1015
4.0
P10809_1030
7.1
P10809_1049
9.7
P10809_1068
6.0
P10809_1085
8.6
P10809_1112
5.9
Naive CD8 T-cell nTPM: 8.1
Samples: 6
Max nTPM: 20.4
Min nTPM: 3.5
P10809_1016
3.5
P10809_1031
4.5
P10809_1050
7.6
P10809_1069
6.2
P10809_1087
20.4
P10809_1110
6.4
T-reg nTPM: 27.3
Samples: 6
Max nTPM: 37.3
Min nTPM: 9.6
P10809_1018
9.6
P10809_1037
32.0
P10809_1056
24.8
P10809_1075
37.3
P10809_1094
30.0
P10809_1106
30.0
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
27.9
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 11.8
Samples: 4
Max nTPM: 13.0
Min nTPM: 10.0
RHH5202_R3573
12.3
RHH5230_R3602
10.0
RHH5259_R3631
13.0
RHH5288_R3660
12.0
Effector memory CD8 T-cell nTPM: 20.2
Samples: 4
Max nTPM: 31.8
Min nTPM: 10.7
RHH5203_R3574
10.7
RHH5231_R3603
20.1
RHH5260_R3632
18.1
RHH5289_R3661
31.8
MAIT T-cell nTPM: 19.7
Samples: 4
Max nTPM: 21.4
Min nTPM: 15.2
RHH5233_R3605
20.8
RHH5205_R3576
21.4
RHH5262_R3634
21.2
RHH5297_R3663
15.2
Memory CD4 T-cell TFH nTPM: 11.0
Samples: 4
Max nTPM: 15.6
Min nTPM: 7.0
RHH5300_R3666
7.0
RHH5236_R3608
15.6
RHH5265_R3637
10.8
RHH5208_R3579
10.5
Memory CD4 T-cell Th1 nTPM: 10.9
Samples: 4
Max nTPM: 21.2
Min nTPM: 4.1
RHH5210_R3581
4.1
RHH5302_R3668
6.7
RHH5238_R3610
21.2
RHH5267_R3639
11.6
Memory CD4 T-cell Th1/Th17 nTPM: 13.0
Samples: 4
Max nTPM: 13.2
Min nTPM: 12.4
RHH5303_R3669
13.1
RHH5211_R3582
12.4
RHH5239_R3611
13.2
RHH5268_R3640
13.2
Memory CD4 T-cell Th17 nTPM: 15.4
Samples: 4
Max nTPM: 18.7
Min nTPM: 7.8
RHH5304_R3670
7.8
RHH5212_R3583
18.7
RHH5240_R3612
18.2
RHH5269_R3641
16.9
Memory CD4 T-cell Th2 nTPM: 18.5
Samples: 4
Max nTPM: 22.7
Min nTPM: 16.1
RHH5305_R3671
17.5
RHH5213_R3584
22.7
RHH5241_R3613
17.6
RHH5270_R3642
16.1
Naive CD4 T-cell nTPM: 6.9
Samples: 4
Max nTPM: 11.8
Min nTPM: 2.1
RHH5306_R3672
11.8
RHH5214_R3585
4.5
RHH5242_R3614
2.1
RHH5271_R3643
9.0
Naive CD8 T-cell nTPM: 8.5
Samples: 4
Max nTPM: 13.2
Min nTPM: 5.0
RHH5201_R3572
10.3
RHH5229_R3601
5.6
RHH5258_R3630
13.2
RHH5287_R3659
5.0
Non-Vd2 gdTCR nTPM: 27.9
Samples: 4
Max nTPM: 36.7
Min nTPM: 18.5
RHH5235_R3607
20.5
RHH5264_R3636
36.7
RHH5207_R3578
35.8
RHH5299_R3665
18.5
T-reg nTPM: 20.1
Samples: 4
Max nTPM: 24.8
Min nTPM: 17.2
RHH5301_R3667
20.4
RHH5237_R3609
24.8
RHH5266_R3638
17.2
RHH5209_R3580
17.8
Terminal effector memory CD4 T-cell nTPM: 23.3
Samples: 2
Max nTPM: 25.8
Min nTPM: 20.8
RHH5243_R3615
20.8
RHH5272_R3644
25.8
Terminal effector memory CD8 T-cell nTPM: 27.7
Samples: 4
Max nTPM: 32.6
Min nTPM: 21.2
RHH5232_R3604
32.6
RHH5204_R3575
21.2
RHH5261_R3633
25.0
RHH5296_R3662
31.8
Vd2 gdTCR nTPM: 14.6
Samples: 4
Max nTPM: 23.2
Min nTPM: 9.2
RHH5234_R3606
15.1
RHH5206_R3577
23.2
RHH5263_R3635
9.2
RHH5298_R3664
10.9
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
