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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
27.0
nTPM
Monaco:
18.5
nTPM
Schmiedel:
119.2
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
27.0
HPA sample
nTPM
gdT-cell nTPM: 13.3
Samples: 6
Max nTPM: 16.0
Min nTPM: 10.2
P10809_1007
16.0
P10809_1022
10.3
P10809_1041
15.2
P10809_1060
15.0
P10809_1077
10.2
P10809_1098
13.0
MAIT T-cell nTPM: 27.0
Samples: 6
Max nTPM: 40.1
Min nTPM: 16.0
P10809_1006
40.1
P10809_1024
26.1
P10809_1043
16.0
P10809_1062
22.9
P10809_1083
29.1
P10809_1097
27.8
Memory CD4 T-cell nTPM: 19.5
Samples: 6
Max nTPM: 23.1
Min nTPM: 14.7
P10809_1014
21.7
P10809_1026
18.4
P10809_1045
18.6
P10809_1064
14.7
P10809_1086
23.1
P10809_1113
20.5
Memory CD8 T-cell nTPM: 17.9
Samples: 5
Max nTPM: 22.5
Min nTPM: 14.4
P10809_1012
22.5
P10809_1027
15.9
P10809_1046
14.8
P10809_1065
14.4
P10809_1111
21.8
Naive CD4 T-cell nTPM: 12.9
Samples: 6
Max nTPM: 19.1
Min nTPM: 9.1
P10809_1015
19.1
P10809_1030
17.0
P10809_1049
9.5
P10809_1068
9.1
P10809_1085
9.7
P10809_1112
13.1
Naive CD8 T-cell nTPM: 14.6
Samples: 6
Max nTPM: 21.5
Min nTPM: 9.9
P10809_1016
21.5
P10809_1031
11.5
P10809_1050
13.4
P10809_1069
9.9
P10809_1087
18.2
P10809_1110
12.8
T-reg nTPM: 13.1
Samples: 6
Max nTPM: 20.2
Min nTPM: 3.1
P10809_1018
20.2
P10809_1037
9.3
P10809_1056
3.1
P10809_1075
19.6
P10809_1094
14.2
P10809_1106
12.4
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
18.5
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 11.5
Samples: 4
Max nTPM: 18.9
Min nTPM: 4.4
RHH5202_R3573
4.4
RHH5230_R3602
11.3
RHH5259_R3631
11.2
RHH5288_R3660
18.9
Effector memory CD8 T-cell nTPM: 7.9
Samples: 4
Max nTPM: 15.0
Min nTPM: 2.6
RHH5203_R3574
6.9
RHH5231_R3603
15.0
RHH5260_R3632
2.6
RHH5289_R3661
7.1
MAIT T-cell nTPM: 5.2
Samples: 4
Max nTPM: 8.7
Min nTPM: 1.8
RHH5233_R3605
8.7
RHH5205_R3576
4.7
RHH5262_R3634
5.6
RHH5297_R3663
1.8
Memory CD4 T-cell TFH nTPM: 6.8
Samples: 4
Max nTPM: 8.0
Min nTPM: 5.9
RHH5300_R3666
5.9
RHH5236_R3608
8.0
RHH5265_R3637
7.2
RHH5208_R3579
5.9
Memory CD4 T-cell Th1 nTPM: 9.4
Samples: 4
Max nTPM: 18.9
Min nTPM: 0.0
RHH5210_R3581
0.0
RHH5302_R3668
11.6
RHH5238_R3610
18.9
RHH5267_R3639
6.9
Memory CD4 T-cell Th1/Th17 nTPM: 6.1
Samples: 4
Max nTPM: 8.0
Min nTPM: 1.3
RHH5303_R3669
7.5
RHH5211_R3582
1.3
RHH5239_R3611
7.6
RHH5268_R3640
8.0
Memory CD4 T-cell Th17 nTPM: 4.6
Samples: 4
Max nTPM: 8.0
Min nTPM: 0.5
RHH5304_R3670
8.0
RHH5212_R3583
2.1
RHH5240_R3612
0.5
RHH5269_R3641
7.6
Memory CD4 T-cell Th2 nTPM: 10.0
Samples: 4
Max nTPM: 18.8
Min nTPM: 4.5
RHH5305_R3671
18.8
RHH5213_R3584
10.9
RHH5241_R3613
4.5
RHH5270_R3642
5.9
Naive CD4 T-cell nTPM: 7.2
Samples: 4
Max nTPM: 15.5
Min nTPM: 0.0
RHH5306_R3672
7.8
RHH5214_R3585
0.0
RHH5242_R3614
5.4
RHH5271_R3643
15.5
Naive CD8 T-cell nTPM: 7.0
Samples: 4
Max nTPM: 12.3
Min nTPM: 4.6
RHH5201_R3572
5.4
RHH5229_R3601
5.8
RHH5258_R3630
4.6
RHH5287_R3659
12.3
Non-Vd2 gdTCR nTPM: 7.1
Samples: 4
Max nTPM: 11.9
Min nTPM: 3.4
RHH5235_R3607
6.9
RHH5264_R3636
11.9
RHH5207_R3578
3.4
RHH5299_R3665
6.3
T-reg nTPM: 0.9
Samples: 4
Max nTPM: 1.9
Min nTPM: 0.0
RHH5301_R3667
0.0
RHH5237_R3609
1.9
RHH5266_R3638
1.8
RHH5209_R3580
0.0
Terminal effector memory CD4 T-cell nTPM: 5.3
Samples: 2
Max nTPM: 5.6
Min nTPM: 5.0
RHH5243_R3615
5.0
RHH5272_R3644
5.6
Terminal effector memory CD8 T-cell nTPM: 9.2
Samples: 4
Max nTPM: 16.7
Min nTPM: 4.9
RHH5232_R3604
4.9
RHH5204_R3575
16.7
RHH5261_R3633
8.2
RHH5296_R3662
6.9
Vd2 gdTCR nTPM: 18.5
Samples: 4
Max nTPM: 27.8
Min nTPM: 6.6
RHH5234_R3606
18.4
RHH5206_R3577
21.2
RHH5263_R3635
6.6
RHH5298_R3664
27.8
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
