HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
RNA expressioni
Consensus:75.7 nTPM
HPA Brain:40.9 nTPM
GTEx:75.7 nTPM
FANTOM5:34.5 Scaled Tags Per Million
Pig:48.4 nTPM
Mouse:65.1 nTPM
Allen mouse:1.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA044143
Glial cells Low
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 40.9
Sample id Sample description nTPM
Hippocampus
nTPM: 34.9
1898 Male, age 80, left hemisphere 46.1
1855 Male, age 76, left hemisphere 37.7
2621 Female, age 67, right hemisphere 34.8
1911 Female, age 85, right hemisphere 33.6
2529 Female, age 94, left hemisphere 32.0
2148 Female, age 91, left hemisphere 25.3
Dentate gyrus
nTPM: 32.3
1927 Female, age 91, both hemispheres 41.1
2010 Male, age 76, both hemispheres 35.0
2530 Female, age 94, left hemisphere 30.7
2531 Female, age 67, both hemispheres 30.6
2246 Female, age 85, both hemispheres 30.0
2528 Male, age 74, both hemispheres 26.3
Entorhinal gyrus
nTPM: 29.6
1938 Female, age 85, left hemisphere 37.7
2686 Male, age 75, right hemisphere 30.5
1787 Male, age 76, left hemisphere 29.8
2613 Female, age 94, left hemisphere 28.1
2764 Male, age 80, right hemisphere 27.8
2117 Female, age 91, right hemisphere 23.8
Hippocampus, CA1
nTPM: 40.7
2749 Male, age 80, left hemisphere 65.3
1873 Female, age 85, both hemispheres 42.9
2527 Male, age 74, both hemispheres 36.9
2045 Male, age 76, both hemispheres 32.8
2082 Female, age 91, right hemisphere 25.5
Hippocampus, CA2
nTPM: 34.5
1892 Male, age 76, both hemispheres 44.9
1963 Male, age 80, left hemisphere 44.3
2249 Male, age 74, both hemispheres 33.0
2437 Female, age 94, left hemisphere 31.2
1940 Female, age 85, left hemisphere 29.2
2113 Female, age 91, right hemisphere 24.4
Hippocampus, CA3
nTPM: 33.1
2137 Male, age 80, left hemisphere 50.1
1867 Male, age 76, both hemispheres 38.6
1891 Female, age 85, both hemispheres 31.2
2436 Male, age 74, both hemispheres 28.6
2861 Female, age 67, both hemispheres 25.5
2620 Female, age 94, left hemisphere 24.8
Parahippocampal cortex
nTPM: 34.3
1850 Male, age 80, both hemispheres 49.3
2245 Female, age 91, both hemispheres 37.4
1933 Female, age 85, both hemispheres 37.2
2693 Female, age 94, both hemispheres 35.1
1990 Female, age 91, right hemisphere 33.3
2532 Female, age 72, left hemisphere 33.0
2018 Male, age 76, both hemispheres 32.3
2250 Female, age 67, right hemisphere 31.7
2622 Female, age 67, right hemisphere 27.7
2692 Male, age 74, both hemispheres 26.5
Perirhinal gyrus
nTPM: 40.9
1794 Male, age 80, right hemisphere 46.9
1841 Female, age 85, right hemisphere 46.5
1847 Female, age 91, left hemisphere 40.0
2521 Female, age 94, right hemisphere 36.3
2848 Male, age 76, right hemisphere 35.0
Subiculum
nTPM: 30.3
1901 Male, age 80, both hemispheres 41.5
2438 Female, age 94, left hemisphere 33.7
1977 Female, age 85, both hemispheres 31.1
2042 Male, age 76, both hemispheres 27.6
2619 Male, age 74, both hemispheres 24.7
2729 Female, age 91, right hemisphere 22.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 75.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 75.7
Samples: 197

Max nTPM: 227.5
Min nTPM: 31.7
Std nTPM: 24.4
Median nTPM: 73.4
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 227.5
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 205.1
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 137.0
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 132.4
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 130.0
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 128.4
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 121.9
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 120.2
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 119.0
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 118.1
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 115.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 34.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 34.5
FF:10169-103B7 60 years, female 45.6
FF:10153-102I9 76 years, female 23.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 48.4
Pig sample Sample description nTPM
Subiculum
nTPM: 43.4
Samples: 4

Max nTPM: 54.7
Min nTPM: 36.5
Sample A Female 54.7
Sample B Female 41.6
Sample C Male 36.5
Sample D Male 40.6
Dorsal hippocampus
nTPM: 47.5
Samples: 4

Max nTPM: 54.8
Min nTPM: 43.0
Sample A Female 54.8
Sample B Female 44.2
Sample C Male 48.0
Sample D Male 43.0
Entorhinal cortex
nTPM: 48.4
Samples: 4

Max nTPM: 59.1
Min nTPM: 43.2
Sample A Female 44.3
Sample B Female 59.1
Sample C Male 46.8
Sample D Male 43.2
Ventral hippocampus
nTPM: 39.2
Samples: 4

Max nTPM: 44.6
Min nTPM: 34.1
Sample A Female 42.1
Sample B Female 35.8
Sample C Male 34.1
Sample D Male 44.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 65.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 53.4
Samples: 4

Max nTPM: 59.2
Min nTPM: 47.2
Sample A Male 49.9
Sample B Male 59.2
Sample C Female 57.2
Sample D Female 47.2
Hippocampal formation
nTPM: 65.1
Samples: 4

Max nTPM: 81.0
Min nTPM: 58.9
Sample A Male 81.0
Sample B Male 58.9
Sample C Female 61.1
Sample D Female 59.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.3
69014536 Antisense, RP_050310_01_C09, Mouse strain C57BL/6J (56 days, male) 1.3

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