HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: High
RNA expressioni
Consensus:38.9 nTPM
HPA Brain:33.5 nTPM
GTEx:38.9 nTPM
FANTOM5:81.7 Scaled Tags Per Million
Pig:33.5 nTPM
Mouse:105.0 nTPM
Allen mouse:6.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA036921Antibody HPA036922
Glial cells LowLow
Neuronal cells HighHigh



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 33.5
Sample id Sample description nTPM
Hippocampus
nTPM: 30.1
1898 Male, age 80, left hemisphere 40.1
1855 Male, age 76, left hemisphere 30.8
2621 Female, age 67, right hemisphere 29.6
2529 Female, age 94, left hemisphere 27.3
2148 Female, age 91, left hemisphere 26.5
1911 Female, age 85, right hemisphere 26.2
Dentate gyrus
nTPM: 27.9
2010 Male, age 76, both hemispheres 33.2
1927 Female, age 91, both hemispheres 31.6
2528 Male, age 74, both hemispheres 30.5
2246 Female, age 85, both hemispheres 27.3
2530 Female, age 94, left hemisphere 24.3
2531 Female, age 67, both hemispheres 20.4
Entorhinal gyrus
nTPM: 25.9
1938 Female, age 85, left hemisphere 30.6
2764 Male, age 80, right hemisphere 28.6
2117 Female, age 91, right hemisphere 27.9
1787 Male, age 76, left hemisphere 26.7
2686 Male, age 75, right hemisphere 20.8
2613 Female, age 94, left hemisphere 20.6
Hippocampus, CA1
nTPM: 33.5
2749 Male, age 80, left hemisphere 51.4
1873 Female, age 85, both hemispheres 31.4
2527 Male, age 74, both hemispheres 30.7
2045 Male, age 76, both hemispheres 27.4
2082 Female, age 91, right hemisphere 26.4
Hippocampus, CA2
nTPM: 30.5
1963 Male, age 80, left hemisphere 36.1
1892 Male, age 76, both hemispheres 35.0
2249 Male, age 74, both hemispheres 33.9
1940 Female, age 85, left hemisphere 27.6
2113 Female, age 91, right hemisphere 26.1
2437 Female, age 94, left hemisphere 24.3
Hippocampus, CA3
nTPM: 29.9
2137 Male, age 80, left hemisphere 43.0
1867 Male, age 76, both hemispheres 37.0
2436 Male, age 74, both hemispheres 33.0
1891 Female, age 85, both hemispheres 27.1
2620 Female, age 94, left hemisphere 21.8
2861 Female, age 67, both hemispheres 17.6
Parahippocampal cortex
nTPM: 27.9
1850 Male, age 80, both hemispheres 33.7
1990 Female, age 91, right hemisphere 30.8
1933 Female, age 85, both hemispheres 30.2
2250 Female, age 67, right hemisphere 30.0
2018 Male, age 76, both hemispheres 29.6
2245 Female, age 91, both hemispheres 29.3
2532 Female, age 72, left hemisphere 28.1
2693 Female, age 94, both hemispheres 28.0
2692 Male, age 74, both hemispheres 20.4
2622 Female, age 67, right hemisphere 19.0
Perirhinal gyrus
nTPM: 31.4
1847 Female, age 91, left hemisphere 37.2
1794 Male, age 80, right hemisphere 33.5
1841 Female, age 85, right hemisphere 32.9
2521 Female, age 94, right hemisphere 28.9
2848 Male, age 76, right hemisphere 24.4
Subiculum
nTPM: 26.8
1901 Male, age 80, both hemispheres 32.2
1977 Female, age 85, both hemispheres 30.1
2729 Female, age 91, right hemisphere 26.2
2042 Male, age 76, both hemispheres 25.0
2438 Female, age 94, left hemisphere 24.6
2619 Male, age 74, both hemispheres 22.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 38.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 38.9
Samples: 197

Max nTPM: 76.3
Min nTPM: 25.4
Std nTPM: 8.0
Median nTPM: 37.1
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 76.3
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 71.4
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 69.7
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 62.5
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 58.5
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 57.5
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 54.2
GTEX-11GS4-0011-R1a-SM-DO129 60-69 years, male 53.8
GTEX-1A3MX-0011-R1b-SM-7P8PH 60-69 years, male 53.8
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 53.7
GTEX-1GN73-0011-R1a-SM-CKZNT 60-69 years, male 53.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 81.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 81.7
FF:10169-103B7 60 years, female 98.6
FF:10153-102I9 76 years, female 64.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 33.5
Pig sample Sample description nTPM
Subiculum
nTPM: 26.5
Samples: 4

Max nTPM: 31.1
Min nTPM: 24.2
Sample A Female 31.1
Sample B Female 24.2
Sample C Male 25.0
Sample D Male 25.5
Dorsal hippocampus
nTPM: 33.5
Samples: 4

Max nTPM: 41.9
Min nTPM: 28.3
Sample A Female 41.9
Sample B Female 34.7
Sample C Male 28.9
Sample D Male 28.3
Entorhinal cortex
nTPM: 24.7
Samples: 4

Max nTPM: 28.5
Min nTPM: 21.2
Sample A Female 26.1
Sample B Female 28.5
Sample C Male 22.8
Sample D Male 21.2
Ventral hippocampus
nTPM: 29.8
Samples: 4

Max nTPM: 37.0
Min nTPM: 22.5
Sample A Female 29.9
Sample B Female 22.5
Sample C Male 29.7
Sample D Male 37.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 105.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 86.3
Samples: 4

Max nTPM: 96.6
Min nTPM: 79.3
Sample A Male 79.3
Sample B Male 88.1
Sample C Female 96.6
Sample D Female 81.3
Hippocampal formation
nTPM: 105.0
Samples: 4

Max nTPM: 120.9
Min nTPM: 96.0
Sample A Male 120.9
Sample B Male 102.0
Sample C Female 101.1
Sample D Female 96.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 6.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.1
68269288 Antisense, RP_041129_01_E07, Mouse strain C57BL/6J (56 days, male) 6.1

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