HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: High
RNA expressioni
Consensus:42.2 nTPM
HPA Brain:15.5 nTPM
GTEx:42.2 nTPM
FANTOM5:126.4 Scaled Tags Per Million
Pig:40.2 nTPM
Mouse:40.2 nTPM
Allen mouse:9.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA026964
Glial cells Not detected
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 15.5
Sample id Sample description nTPM
Hippocampus
nTPM: 12.2
1898 Male, age 80, left hemisphere 16.0
2621 Female, age 67, right hemisphere 15.5
2148 Female, age 91, left hemisphere 12.8
1911 Female, age 85, right hemisphere 11.4
2529 Female, age 94, left hemisphere 9.9
1855 Male, age 76, left hemisphere 7.9
Dentate gyrus
nTPM: 12.0
1927 Female, age 91, both hemispheres 14.1
2010 Male, age 76, both hemispheres 13.1
2531 Female, age 67, both hemispheres 12.6
2530 Female, age 94, left hemisphere 11.8
2246 Female, age 85, both hemispheres 10.2
2528 Male, age 74, both hemispheres 10.2
Entorhinal gyrus
nTPM: 11.7
2613 Female, age 94, left hemisphere 17.3
1787 Male, age 76, left hemisphere 12.8
2764 Male, age 80, right hemisphere 12.1
2686 Male, age 75, right hemisphere 11.2
1938 Female, age 85, left hemisphere 10.3
2117 Female, age 91, right hemisphere 6.8
Hippocampus, CA1
nTPM: 15.5
2749 Male, age 80, left hemisphere 26.7
2527 Male, age 74, both hemispheres 14.7
2045 Male, age 76, both hemispheres 14.1
1873 Female, age 85, both hemispheres 12.8
2082 Female, age 91, right hemisphere 9.1
Hippocampus, CA2
nTPM: 11.9
1963 Male, age 80, left hemisphere 19.7
1892 Male, age 76, both hemispheres 16.0
2249 Male, age 74, both hemispheres 11.5
2113 Female, age 91, right hemisphere 9.4
2437 Female, age 94, left hemisphere 8.9
1940 Female, age 85, left hemisphere 6.0
Hippocampus, CA3
nTPM: 12.7
2620 Female, age 94, left hemisphere 16.0
2137 Male, age 80, left hemisphere 14.0
2436 Male, age 74, both hemispheres 14.0
1891 Female, age 85, both hemispheres 12.2
1867 Male, age 76, both hemispheres 11.9
2861 Female, age 67, both hemispheres 8.0
Parahippocampal cortex
nTPM: 12.7
2693 Female, age 94, both hemispheres 15.5
2245 Female, age 91, both hemispheres 13.9
1850 Male, age 80, both hemispheres 13.6
1933 Female, age 85, both hemispheres 13.5
1990 Female, age 91, right hemisphere 13.1
2622 Female, age 67, right hemisphere 13.0
2532 Female, age 72, left hemisphere 11.8
2018 Male, age 76, both hemispheres 10.9
2692 Male, age 74, both hemispheres 10.7
2250 Female, age 67, right hemisphere 10.6
Perirhinal gyrus
nTPM: 13.7
1794 Male, age 80, right hemisphere 16.2
2521 Female, age 94, right hemisphere 13.7
2848 Male, age 76, right hemisphere 13.0
1847 Female, age 91, left hemisphere 12.9
1841 Female, age 85, right hemisphere 12.5
Subiculum
nTPM: 11.4
2729 Female, age 91, right hemisphere 13.8
2619 Male, age 74, both hemispheres 12.3
1977 Female, age 85, both hemispheres 11.5
2438 Female, age 94, left hemisphere 11.4
1901 Male, age 80, both hemispheres 10.3
2042 Male, age 76, both hemispheres 9.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 42.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 42.2
Samples: 197

Max nTPM: 104.5
Min nTPM: 11.1
Std nTPM: 15.7
Median nTPM: 40.3
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 104.5
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 102.3
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 96.0
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 81.2
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 80.0
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 77.4
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 77.3
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 76.9
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 72.5
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 68.5
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 67.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 126.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 126.4
FF:10169-103B7 60 years, female 142.2
FF:10153-102I9 76 years, female 110.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 40.2
Pig sample Sample description nTPM
Subiculum
nTPM: 38.4
Samples: 4

Max nTPM: 41.9
Min nTPM: 34.3
Sample A Female 41.9
Sample B Female 34.3
Sample C Male 41.7
Sample D Male 35.6
Dorsal hippocampus
nTPM: 38.2
Samples: 4

Max nTPM: 47.5
Min nTPM: 31.6
Sample A Female 47.5
Sample B Female 39.1
Sample C Male 34.6
Sample D Male 31.6
Entorhinal cortex
nTPM: 40.2
Samples: 4

Max nTPM: 46.5
Min nTPM: 36.3
Sample A Female 46.5
Sample B Female 36.3
Sample C Male 37.7
Sample D Male 40.3
Ventral hippocampus
nTPM: 39.8
Samples: 4

Max nTPM: 51.6
Min nTPM: 26.5
Sample A Female 42.7
Sample B Female 26.5
Sample C Male 51.6
Sample D Male 38.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 40.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 40.2
Samples: 4

Max nTPM: 42.5
Min nTPM: 37.5
Sample A Male 37.5
Sample B Male 41.7
Sample C Female 39.1
Sample D Female 42.5
Hippocampal formation
nTPM: 40.1
Samples: 4

Max nTPM: 43.8
Min nTPM: 35.5
Sample A Male 35.5
Sample B Male 40.0
Sample C Female 41.2
Sample D Female 43.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 9.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 9.7
69059968 Antisense, RP_050317_04_H01, Mouse strain C57BL/6J (56 days, male) 9.7

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