HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:16.9 nTPM
HPA Brain:17.6 nTPM
GTEx:16.9 nTPM
FANTOM5:9.0 Scaled Tags Per Million
Pig:16.8 nTPM
Mouse:11.1 nTPM
Allen mouse:1.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA051493
Glial cells Medium
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 17.6
Sample id Sample description nTPM
Hippocampus
nTPM: 16.8
2621 Female, age 67, right hemisphere 17.9
2148 Female, age 91, left hemisphere 17.8
1855 Male, age 76, left hemisphere 17.6
2529 Female, age 94, left hemisphere 16.6
1911 Female, age 85, right hemisphere 15.9
1898 Male, age 80, left hemisphere 15.0
Dentate gyrus
nTPM: 16.7
2531 Female, age 67, both hemispheres 18.4
2530 Female, age 94, left hemisphere 17.9
2246 Female, age 85, both hemispheres 16.8
2010 Male, age 76, both hemispheres 16.3
1927 Female, age 91, both hemispheres 16.0
2528 Male, age 74, both hemispheres 14.6
Entorhinal gyrus
nTPM: 16.9
2686 Male, age 75, right hemisphere 19.8
2613 Female, age 94, left hemisphere 17.6
2764 Male, age 80, right hemisphere 17.2
1787 Male, age 76, left hemisphere 16.2
2117 Female, age 91, right hemisphere 15.6
1938 Female, age 85, left hemisphere 15.2
Hippocampus, CA1
nTPM: 15.6
2045 Male, age 76, both hemispheres 16.3
2749 Male, age 80, left hemisphere 16.0
2082 Female, age 91, right hemisphere 15.6
2527 Male, age 74, both hemispheres 15.2
1873 Female, age 85, both hemispheres 14.8
Hippocampus, CA2
nTPM: 15.0
1940 Female, age 85, left hemisphere 16.0
2437 Female, age 94, left hemisphere 15.8
1963 Male, age 80, left hemisphere 15.1
2113 Female, age 91, right hemisphere 14.5
1892 Male, age 76, both hemispheres 14.3
2249 Male, age 74, both hemispheres 14.3
Hippocampus, CA3
nTPM: 17.6
2620 Female, age 94, left hemisphere 22.2
2861 Female, age 67, both hemispheres 21.1
1867 Male, age 76, both hemispheres 17.6
2137 Male, age 80, left hemisphere 15.8
1891 Female, age 85, both hemispheres 15.3
2436 Male, age 74, both hemispheres 13.5
Parahippocampal cortex
nTPM: 16.0
2622 Female, age 67, right hemisphere 20.4
2245 Female, age 91, both hemispheres 16.8
2692 Male, age 74, both hemispheres 16.8
2532 Female, age 72, left hemisphere 16.4
2693 Female, age 94, both hemispheres 15.9
1933 Female, age 85, both hemispheres 15.2
2018 Male, age 76, both hemispheres 15.1
1850 Male, age 80, both hemispheres 14.7
1990 Female, age 91, right hemisphere 14.4
2250 Female, age 67, right hemisphere 14.2
Perirhinal gyrus
nTPM: 14.1
1847 Female, age 91, left hemisphere 15.0
1794 Male, age 80, right hemisphere 14.9
2848 Male, age 76, right hemisphere 14.6
1841 Female, age 85, right hemisphere 13.9
2521 Female, age 94, right hemisphere 12.1
Subiculum
nTPM: 16.2
2438 Female, age 94, left hemisphere 17.8
2042 Male, age 76, both hemispheres 17.0
2619 Male, age 74, both hemispheres 16.9
2729 Female, age 91, right hemisphere 16.0
1901 Male, age 80, both hemispheres 15.7
1977 Female, age 85, both hemispheres 13.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 16.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 16.9
Samples: 197

Max nTPM: 32.4
Min nTPM: 7.9
Std nTPM: 3.2
Median nTPM: 16.5
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 32.4
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 27.1
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 25.8
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 25.1
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 23.7
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 23.5
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 22.2
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 22.1
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 22.0
GTEX-13112-0011-R1b-SM-5HL7K 50-59 years, male 21.6
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 21.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 9.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 9.0
FF:10153-102I9 76 years, female 12.9
FF:10169-103B7 60 years, female 5.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 16.8
Pig sample Sample description nTPM
Subiculum
nTPM: 16.0
Samples: 4

Max nTPM: 19.6
Min nTPM: 14.3
Sample A Female 19.6
Sample B Female 14.5
Sample C Male 15.6
Sample D Male 14.3
Dorsal hippocampus
nTPM: 16.0
Samples: 4

Max nTPM: 17.9
Min nTPM: 13.9
Sample A Female 17.9
Sample B Female 16.5
Sample C Male 15.8
Sample D Male 13.9
Entorhinal cortex
nTPM: 16.3
Samples: 4

Max nTPM: 17.8
Min nTPM: 15.4
Sample A Female 16.2
Sample B Female 15.4
Sample C Male 17.8
Sample D Male 15.8
Ventral hippocampus
nTPM: 16.9
Samples: 4

Max nTPM: 20.2
Min nTPM: 13.4
Sample A Female 15.2
Sample B Female 13.4
Sample C Male 20.2
Sample D Male 18.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 11.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 10.8
Samples: 4

Max nTPM: 12.4
Min nTPM: 9.8
Sample A Male 10.9
Sample B Male 12.4
Sample C Female 9.8
Sample D Female 9.9
Hippocampal formation
nTPM: 11.1
Samples: 4

Max nTPM: 12.3
Min nTPM: 9.1
Sample A Male 12.3
Sample B Male 12.3
Sample C Female 9.1
Sample D Female 10.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.5
69549613 Antisense, RP_050217_02_G01, Mouse strain C57BL/6J (56 days, male) 1.5

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