HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:19.6 nTPM
HPA Brain:32.3 nTPM
GTEx:19.6 nTPM
FANTOM5:26.9 Scaled Tags Per Million
Pig:16.6 nTPM
Mouse:9.8 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA016616Antibody CAB012465
Glial cells Not detectedLow
Neuronal cells MediumMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 32.3
Sample id Sample description nTPM
Hippocampus
nTPM: 31.3
1898 Male, age 80, left hemisphere 40.3
1855 Male, age 76, left hemisphere 34.4
2621 Female, age 67, right hemisphere 32.0
2148 Female, age 91, left hemisphere 31.2
2529 Female, age 94, left hemisphere 25.8
1911 Female, age 85, right hemisphere 24.5
Dentate gyrus
nTPM: 29.7
2010 Male, age 76, both hemispheres 32.5
2530 Female, age 94, left hemisphere 31.1
1927 Female, age 91, both hemispheres 31.0
2246 Female, age 85, both hemispheres 28.4
2528 Male, age 74, both hemispheres 27.4
2531 Female, age 67, both hemispheres 27.4
Entorhinal gyrus
nTPM: 26.9
2117 Female, age 91, right hemisphere 28.9
2686 Male, age 75, right hemisphere 28.4
2764 Male, age 80, right hemisphere 26.4
2613 Female, age 94, left hemisphere 26.3
1787 Male, age 76, left hemisphere 26.2
1938 Female, age 85, left hemisphere 25.4
Hippocampus, CA1
nTPM: 32.3
2749 Male, age 80, left hemisphere 43.9
1873 Female, age 85, both hemispheres 33.9
2082 Female, age 91, right hemisphere 29.1
2045 Male, age 76, both hemispheres 28.3
2527 Male, age 74, both hemispheres 25.9
Hippocampus, CA2
nTPM: 29.4
1963 Male, age 80, left hemisphere 38.2
1892 Male, age 76, both hemispheres 35.6
2249 Male, age 74, both hemispheres 26.9
2437 Female, age 94, left hemisphere 26.9
2113 Female, age 91, right hemisphere 25.4
1940 Female, age 85, left hemisphere 23.4
Hippocampus, CA3
nTPM: 30.2
2137 Male, age 80, left hemisphere 35.6
1867 Male, age 76, both hemispheres 32.5
2861 Female, age 67, both hemispheres 31.0
2620 Female, age 94, left hemisphere 29.1
2436 Male, age 74, both hemispheres 27.7
1891 Female, age 85, both hemispheres 25.1
Parahippocampal cortex
nTPM: 24.4
1933 Female, age 85, both hemispheres 27.4
1850 Male, age 80, both hemispheres 26.7
2692 Male, age 74, both hemispheres 26.0
2245 Female, age 91, both hemispheres 24.8
2250 Female, age 67, right hemisphere 24.7
1990 Female, age 91, right hemisphere 23.7
2018 Male, age 76, both hemispheres 23.1
2532 Female, age 72, left hemisphere 22.7
2622 Female, age 67, right hemisphere 22.4
2693 Female, age 94, both hemispheres 22.3
Perirhinal gyrus
nTPM: 25.3
1794 Male, age 80, right hemisphere 29.1
1847 Female, age 91, left hemisphere 26.9
2521 Female, age 94, right hemisphere 25.2
1841 Female, age 85, right hemisphere 24.0
2848 Male, age 76, right hemisphere 21.3
Subiculum
nTPM: 28.1
1901 Male, age 80, both hemispheres 32.6
2729 Female, age 91, right hemisphere 31.8
2042 Male, age 76, both hemispheres 27.8
2438 Female, age 94, left hemisphere 27.5
1977 Female, age 85, both hemispheres 24.5
2619 Male, age 74, both hemispheres 24.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 19.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 19.6
Samples: 197

Max nTPM: 34.9
Min nTPM: 12.2
Std nTPM: 2.9
Median nTPM: 19.5
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 34.9
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 29.7
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 28.3
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 26.9
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 25.9
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 25.8
GTEX-T5JC-0011-R1A-SM-32PM6 20-29 years, male 25.7
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 25.7
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 25.4
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 25.2
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 24.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 26.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 26.9
FF:10153-102I9 76 years, female 28.0
FF:10169-103B7 60 years, female 25.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 16.6
Pig sample Sample description nTPM
Subiculum
nTPM: 14.2
Samples: 4

Max nTPM: 15.1
Min nTPM: 13.7
Sample A Female 13.7
Sample B Female 14.1
Sample C Male 13.9
Sample D Male 15.1
Dorsal hippocampus
nTPM: 16.6
Samples: 4

Max nTPM: 17.4
Min nTPM: 15.8
Sample A Female 16.2
Sample B Female 17.0
Sample C Male 15.8
Sample D Male 17.4
Entorhinal cortex
nTPM: 15.4
Samples: 4

Max nTPM: 15.9
Min nTPM: 14.6
Sample A Female 15.9
Sample B Female 15.5
Sample C Male 14.6
Sample D Male 15.5
Ventral hippocampus
nTPM: 16.1
Samples: 4

Max nTPM: 17.2
Min nTPM: 14.4
Sample A Female 14.4
Sample B Female 15.6
Sample C Male 17.2
Sample D Male 17.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 9.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 9.3
Samples: 4

Max nTPM: 10.3
Min nTPM: 8.1
Sample A Male 10.0
Sample B Male 8.1
Sample C Female 8.8
Sample D Female 10.3
Hippocampal formation
nTPM: 9.8
Samples: 4

Max nTPM: 11.6
Min nTPM: 8.2
Sample A Male 8.2
Sample B Male 10.1
Sample C Female 11.6
Sample D Female 9.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
71763655 Antisense, RP_050921_02_D06, Mouse strain C57BL/6J (56 days, male) 0.1

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