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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
154.9
nTPM
Monaco:
357.1
nTPM
Schmiedel:
188.6
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
154.9
HPA sample
nTPM
gdT-cell nTPM: 129.5
Samples: 6
Max nTPM: 160.4
Min nTPM: 93.3
P10809_1007
136.8
P10809_1022
160.3
P10809_1041
160.4
P10809_1060
93.3
P10809_1077
125.3
P10809_1098
101.1
MAIT T-cell nTPM: 154.9
Samples: 6
Max nTPM: 197.1
Min nTPM: 118.5
P10809_1006
178.4
P10809_1024
197.1
P10809_1043
162.6
P10809_1062
146.7
P10809_1083
118.5
P10809_1097
126.2
Memory CD4 T-cell nTPM: 105.0
Samples: 6
Max nTPM: 127.2
Min nTPM: 88.9
P10809_1014
122.2
P10809_1026
94.3
P10809_1045
127.2
P10809_1064
100.5
P10809_1086
96.8
P10809_1113
88.9
Memory CD8 T-cell nTPM: 117.7
Samples: 5
Max nTPM: 146.4
Min nTPM: 97.8
P10809_1012
115.6
P10809_1027
114.7
P10809_1046
146.4
P10809_1065
114.0
P10809_1111
97.8
Naive CD4 T-cell nTPM: 64.0
Samples: 6
Max nTPM: 82.8
Min nTPM: 50.8
P10809_1015
82.8
P10809_1030
50.8
P10809_1049
67.3
P10809_1068
69.6
P10809_1085
53.0
P10809_1112
60.6
Naive CD8 T-cell nTPM: 99.6
Samples: 6
Max nTPM: 117.9
Min nTPM: 71.3
P10809_1016
92.6
P10809_1031
100.8
P10809_1050
99.5
P10809_1069
117.9
P10809_1087
115.5
P10809_1110
71.3
T-reg nTPM: 114.5
Samples: 6
Max nTPM: 138.6
Min nTPM: 88.4
P10809_1018
138.6
P10809_1037
123.8
P10809_1056
88.4
P10809_1075
114.9
P10809_1094
121.8
P10809_1106
99.5
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
357.1
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 254.7
Samples: 4
Max nTPM: 300.3
Min nTPM: 215.4
RHH5202_R3573
217.0
RHH5230_R3602
300.3
RHH5259_R3631
215.4
RHH5288_R3660
286.1
Effector memory CD8 T-cell nTPM: 355.8
Samples: 4
Max nTPM: 392.2
Min nTPM: 341.5
RHH5203_R3574
341.5
RHH5231_R3603
345.9
RHH5260_R3632
343.7
RHH5289_R3661
392.2
MAIT T-cell nTPM: 337.0
Samples: 4
Max nTPM: 393.3
Min nTPM: 284.4
RHH5233_R3605
393.3
RHH5205_R3576
354.8
RHH5262_R3634
284.4
RHH5297_R3663
315.3
Memory CD4 T-cell TFH nTPM: 215.3
Samples: 4
Max nTPM: 230.9
Min nTPM: 200.8
RHH5300_R3666
215.2
RHH5236_R3608
214.1
RHH5265_R3637
200.8
RHH5208_R3579
230.9
Memory CD4 T-cell Th1 nTPM: 214.7
Samples: 4
Max nTPM: 246.3
Min nTPM: 161.4
RHH5210_R3581
161.4
RHH5302_R3668
246.3
RHH5238_R3610
221.6
RHH5267_R3639
229.5
Memory CD4 T-cell Th1/Th17 nTPM: 283.4
Samples: 4
Max nTPM: 333.0
Min nTPM: 260.6
RHH5303_R3669
333.0
RHH5211_R3582
260.6
RHH5239_R3611
276.4
RHH5268_R3640
263.5
Memory CD4 T-cell Th17 nTPM: 303.0
Samples: 4
Max nTPM: 385.8
Min nTPM: 244.3
RHH5304_R3670
322.7
RHH5212_R3583
259.3
RHH5240_R3612
385.8
RHH5269_R3641
244.3
Memory CD4 T-cell Th2 nTPM: 287.3
Samples: 4
Max nTPM: 335.3
Min nTPM: 257.5
RHH5305_R3671
335.3
RHH5213_R3584
291.6
RHH5241_R3613
264.9
RHH5270_R3642
257.5
Naive CD4 T-cell nTPM: 170.2
Samples: 4
Max nTPM: 179.1
Min nTPM: 161.8
RHH5306_R3672
179.1
RHH5214_R3585
161.8
RHH5242_R3614
165.0
RHH5271_R3643
174.7
Naive CD8 T-cell nTPM: 171.4
Samples: 4
Max nTPM: 218.1
Min nTPM: 127.3
RHH5201_R3572
184.6
RHH5229_R3601
155.4
RHH5258_R3630
127.3
RHH5287_R3659
218.1
Non-Vd2 gdTCR nTPM: 357.1
Samples: 4
Max nTPM: 393.1
Min nTPM: 310.2
RHH5235_R3607
393.1
RHH5264_R3636
377.1
RHH5207_R3578
348.0
RHH5299_R3665
310.2
T-reg nTPM: 210.3
Samples: 4
Max nTPM: 254.7
Min nTPM: 175.4
RHH5301_R3667
197.2
RHH5237_R3609
254.7
RHH5266_R3638
213.8
RHH5209_R3580
175.4
Terminal effector memory CD4 T-cell nTPM: 323.3
Samples: 2
Max nTPM: 353.8
Min nTPM: 292.8
RHH5243_R3615
353.8
RHH5272_R3644
292.8
Terminal effector memory CD8 T-cell nTPM: 357.0
Samples: 4
Max nTPM: 405.4
Min nTPM: 260.5
RHH5232_R3604
396.7
RHH5204_R3575
260.5
RHH5261_R3633
365.3
RHH5296_R3662
405.4
Vd2 gdTCR nTPM: 324.0
Samples: 4
Max nTPM: 358.7
Min nTPM: 285.3
RHH5234_R3606
358.7
RHH5206_R3577
323.9
RHH5263_R3635
328.2
RHH5298_R3664
285.3
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
