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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
12.1
nTPM
Monaco:
76.5
nTPM
Schmiedel:
51.7
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
12.1
HPA sample
nTPM
gdT-cell nTPM: 12.2
Samples: 6
Max nTPM: 15.2
Min nTPM: 7.1
P10809_1007
11.3
P10809_1022
7.1
P10809_1041
14.6
P10809_1060
13.2
P10809_1077
11.5
P10809_1098
15.2
MAIT T-cell nTPM: 10.8
Samples: 6
Max nTPM: 14.6
Min nTPM: 6.1
P10809_1006
14.6
P10809_1024
6.1
P10809_1043
13.9
P10809_1062
11.4
P10809_1083
7.9
P10809_1097
10.9
Memory CD4 T-cell nTPM: 10.1
Samples: 6
Max nTPM: 13.4
Min nTPM: 4.8
P10809_1014
11.9
P10809_1026
4.8
P10809_1045
8.6
P10809_1064
10.4
P10809_1086
11.2
P10809_1113
13.4
Memory CD8 T-cell nTPM: 8.7
Samples: 5
Max nTPM: 12.7
Min nTPM: 5.4
P10809_1012
9.9
P10809_1027
5.4
P10809_1046
6.9
P10809_1065
8.4
P10809_1111
12.7
Naive CD4 T-cell nTPM: 8.7
Samples: 6
Max nTPM: 11.4
Min nTPM: 4.4
P10809_1015
10.5
P10809_1030
6.9
P10809_1049
4.4
P10809_1068
9.6
P10809_1085
11.4
P10809_1112
9.2
Naive CD8 T-cell nTPM: 9.3
Samples: 6
Max nTPM: 13.6
Min nTPM: 5.1
P10809_1016
8.5
P10809_1031
5.1
P10809_1050
8.8
P10809_1069
10.9
P10809_1087
13.6
P10809_1110
8.9
T-reg nTPM: 7.0
Samples: 6
Max nTPM: 14.7
Min nTPM: 2.8
P10809_1018
10.5
P10809_1037
2.8
P10809_1056
3.5
P10809_1075
4.6
P10809_1094
14.7
P10809_1106
5.6
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
76.5
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 53.7
Samples: 4
Max nTPM: 61.5
Min nTPM: 47.3
RHH5202_R3573
56.0
RHH5230_R3602
49.8
RHH5259_R3631
61.5
RHH5288_R3660
47.3
Effector memory CD8 T-cell nTPM: 67.6
Samples: 4
Max nTPM: 91.5
Min nTPM: 55.0
RHH5203_R3574
56.0
RHH5231_R3603
67.7
RHH5260_R3632
91.5
RHH5289_R3661
55.0
MAIT T-cell nTPM: 58.2
Samples: 4
Max nTPM: 67.2
Min nTPM: 42.4
RHH5233_R3605
61.3
RHH5205_R3576
61.7
RHH5262_R3634
67.2
RHH5297_R3663
42.4
Memory CD4 T-cell TFH nTPM: 56.8
Samples: 4
Max nTPM: 65.3
Min nTPM: 44.9
RHH5300_R3666
44.9
RHH5236_R3608
54.7
RHH5265_R3637
65.3
RHH5208_R3579
62.1
Memory CD4 T-cell Th1 nTPM: 52.1
Samples: 4
Max nTPM: 61.9
Min nTPM: 40.9
RHH5210_R3581
46.9
RHH5302_R3668
40.9
RHH5238_R3610
61.9
RHH5267_R3639
58.8
Memory CD4 T-cell Th1/Th17 nTPM: 64.3
Samples: 4
Max nTPM: 70.6
Min nTPM: 57.8
RHH5303_R3669
57.8
RHH5211_R3582
60.6
RHH5239_R3611
68.0
RHH5268_R3640
70.6
Memory CD4 T-cell Th17 nTPM: 66.1
Samples: 4
Max nTPM: 75.6
Min nTPM: 55.2
RHH5304_R3670
60.9
RHH5212_R3583
55.2
RHH5240_R3612
75.6
RHH5269_R3641
72.6
Memory CD4 T-cell Th2 nTPM: 57.6
Samples: 4
Max nTPM: 71.5
Min nTPM: 47.8
RHH5305_R3671
47.8
RHH5213_R3584
71.5
RHH5241_R3613
54.1
RHH5270_R3642
56.8
Naive CD4 T-cell nTPM: 45.7
Samples: 4
Max nTPM: 56.1
Min nTPM: 36.0
RHH5306_R3672
36.0
RHH5214_R3585
36.1
RHH5242_R3614
54.4
RHH5271_R3643
56.1
Naive CD8 T-cell nTPM: 47.2
Samples: 4
Max nTPM: 50.3
Min nTPM: 43.7
RHH5201_R3572
43.7
RHH5229_R3601
50.3
RHH5258_R3630
48.4
RHH5287_R3659
46.5
Non-Vd2 gdTCR nTPM: 68.8
Samples: 4
Max nTPM: 82.1
Min nTPM: 49.0
RHH5235_R3607
73.7
RHH5264_R3636
70.4
RHH5207_R3578
82.1
RHH5299_R3665
49.0
T-reg nTPM: 51.6
Samples: 4
Max nTPM: 60.9
Min nTPM: 36.5
RHH5301_R3667
36.5
RHH5237_R3609
49.4
RHH5266_R3638
59.7
RHH5209_R3580
60.9
Terminal effector memory CD4 T-cell nTPM: 76.6
Samples: 2
Max nTPM: 78.1
Min nTPM: 75.0
RHH5243_R3615
75.0
RHH5272_R3644
78.1
Terminal effector memory CD8 T-cell nTPM: 74.9
Samples: 4
Max nTPM: 102.5
Min nTPM: 55.1
RHH5232_R3604
75.7
RHH5204_R3575
66.4
RHH5261_R3633
102.5
RHH5296_R3662
55.1
Vd2 gdTCR nTPM: 67.4
Samples: 4
Max nTPM: 83.8
Min nTPM: 46.0
RHH5234_R3606
67.1
RHH5206_R3577
72.6
RHH5263_R3635
83.8
RHH5298_R3664
46.0
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
