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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
871.4
nTPM
Monaco:
324.5
nTPM
Schmiedel:
180.7
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
871.4
HPA sample
nTPM
gdT-cell nTPM: 352.4
Samples: 6
Max nTPM: 408.6
Min nTPM: 245.7
P10809_1007
245.7
P10809_1022
349.4
P10809_1041
404.3
P10809_1060
322.2
P10809_1077
408.6
P10809_1098
384.2
MAIT T-cell nTPM: 394.8
Samples: 6
Max nTPM: 503.6
Min nTPM: 242.9
P10809_1006
242.9
P10809_1024
453.3
P10809_1043
421.7
P10809_1062
360.1
P10809_1083
386.9
P10809_1097
503.6
Memory CD4 T-cell nTPM: 582.7
Samples: 6
Max nTPM: 682.4
Min nTPM: 425.6
P10809_1014
425.6
P10809_1026
653.0
P10809_1045
682.4
P10809_1064
519.7
P10809_1086
571.0
P10809_1113
644.4
Memory CD8 T-cell nTPM: 475.7
Samples: 5
Max nTPM: 580.6
Min nTPM: 354.0
P10809_1012
354.0
P10809_1027
510.1
P10809_1046
521.1
P10809_1065
412.6
P10809_1111
580.6
Naive CD4 T-cell nTPM: 535.2
Samples: 6
Max nTPM: 763.6
Min nTPM: 349.3
P10809_1015
349.3
P10809_1030
557.7
P10809_1049
763.6
P10809_1068
474.6
P10809_1085
546.5
P10809_1112
519.3
Naive CD8 T-cell nTPM: 438.9
Samples: 6
Max nTPM: 491.5
Min nTPM: 278.9
P10809_1016
278.9
P10809_1031
443.9
P10809_1050
491.5
P10809_1069
476.5
P10809_1087
486.9
P10809_1110
455.8
T-reg nTPM: 871.4
Samples: 6
Max nTPM: 1018.8
Min nTPM: 626.7
P10809_1018
626.7
P10809_1037
884.1
P10809_1056
1018.8
P10809_1075
892.3
P10809_1094
796.6
P10809_1106
1009.9
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
324.5
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 202.3
Samples: 4
Max nTPM: 296.0
Min nTPM: 135.3
RHH5202_R3573
199.1
RHH5230_R3602
135.3
RHH5259_R3631
178.9
RHH5288_R3660
296.0
Effector memory CD8 T-cell nTPM: 196.8
Samples: 4
Max nTPM: 275.6
Min nTPM: 152.7
RHH5203_R3574
275.6
RHH5231_R3603
180.6
RHH5260_R3632
178.4
RHH5289_R3661
152.7
MAIT T-cell nTPM: 154.9
Samples: 4
Max nTPM: 229.9
Min nTPM: 108.7
RHH5233_R3605
142.4
RHH5205_R3576
108.7
RHH5262_R3634
138.4
RHH5297_R3663
229.9
Memory CD4 T-cell TFH nTPM: 324.5
Samples: 4
Max nTPM: 525.5
Min nTPM: 237.2
RHH5300_R3666
249.2
RHH5236_R3608
525.5
RHH5265_R3637
237.2
RHH5208_R3579
286.0
Memory CD4 T-cell Th1 nTPM: 245.5
Samples: 4
Max nTPM: 405.3
Min nTPM: 182.5
RHH5210_R3581
200.3
RHH5302_R3668
405.3
RHH5238_R3610
193.9
RHH5267_R3639
182.5
Memory CD4 T-cell Th1/Th17 nTPM: 229.8
Samples: 4
Max nTPM: 335.7
Min nTPM: 117.7
RHH5303_R3669
335.7
RHH5211_R3582
287.7
RHH5239_R3611
117.7
RHH5268_R3640
178.1
Memory CD4 T-cell Th17 nTPM: 181.8
Samples: 4
Max nTPM: 261.2
Min nTPM: 137.5
RHH5304_R3670
177.0
RHH5212_R3583
261.2
RHH5240_R3612
137.5
RHH5269_R3641
151.5
Memory CD4 T-cell Th2 nTPM: 211.0
Samples: 4
Max nTPM: 280.0
Min nTPM: 180.3
RHH5305_R3671
197.3
RHH5213_R3584
186.2
RHH5241_R3613
280.0
RHH5270_R3642
180.3
Naive CD4 T-cell nTPM: 193.4
Samples: 4
Max nTPM: 293.8
Min nTPM: 127.6
RHH5306_R3672
193.8
RHH5214_R3585
293.8
RHH5242_R3614
158.3
RHH5271_R3643
127.6
Naive CD8 T-cell nTPM: 145.2
Samples: 4
Max nTPM: 194.8
Min nTPM: 103.6
RHH5201_R3572
151.2
RHH5229_R3601
103.6
RHH5258_R3630
194.8
RHH5287_R3659
131.3
Non-Vd2 gdTCR nTPM: 191.3
Samples: 4
Max nTPM: 294.6
Min nTPM: 118.7
RHH5235_R3607
118.7
RHH5264_R3636
186.8
RHH5207_R3578
165.0
RHH5299_R3665
294.6
T-reg nTPM: 283.9
Samples: 4
Max nTPM: 374.5
Min nTPM: 192.8
RHH5301_R3667
369.6
RHH5237_R3609
374.5
RHH5266_R3638
192.8
RHH5209_R3580
198.5
Terminal effector memory CD4 T-cell nTPM: 181.2
Samples: 2
Max nTPM: 235.4
Min nTPM: 126.9
RHH5243_R3615
126.9
RHH5272_R3644
235.4
Terminal effector memory CD8 T-cell nTPM: 240.5
Samples: 4
Max nTPM: 405.3
Min nTPM: 159.3
RHH5232_R3604
159.3
RHH5204_R3575
405.3
RHH5261_R3633
171.7
RHH5296_R3662
225.6
Vd2 gdTCR nTPM: 211.5
Samples: 4
Max nTPM: 307.9
Min nTPM: 134.1
RHH5234_R3606
147.3
RHH5206_R3577
307.9
RHH5263_R3635
134.1
RHH5298_R3664
256.5
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.