HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:2.3 nTPM
HPA Brain:44.8 nTPM
GTEx:2.3 nTPM
FANTOM5:49.1 Scaled Tags Per Million
Pig:12.7 nTPM
Mouse:3.8 nTPM
Allen mouse:0.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA036714Antibody HPA036715
Glial cells LowNot detected
Neuronal cells MediumNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 44.8
Sample id Sample description nTPM
Hippocampus
nTPM: 41.0
2148 Female, age 91, left hemisphere 47.0
1911 Female, age 85, right hemisphere 44.9
2529 Female, age 94, left hemisphere 43.4
1855 Male, age 76, left hemisphere 40.2
2621 Female, age 67, right hemisphere 37.8
1898 Male, age 80, left hemisphere 32.5
Dentate gyrus
nTPM: 39.3
2246 Female, age 85, both hemispheres 45.4
1927 Female, age 91, both hemispheres 43.0
2531 Female, age 67, both hemispheres 41.9
2528 Male, age 74, both hemispheres 40.1
2010 Male, age 76, both hemispheres 35.3
2530 Female, age 94, left hemisphere 30.0
Entorhinal gyrus
nTPM: 42.3
2613 Female, age 94, left hemisphere 48.2
1938 Female, age 85, left hemisphere 44.2
2686 Male, age 75, right hemisphere 43.5
1787 Male, age 76, left hemisphere 41.6
2117 Female, age 91, right hemisphere 39.7
2764 Male, age 80, right hemisphere 36.9
Hippocampus, CA1
nTPM: 44.0
2082 Female, age 91, right hemisphere 46.7
2527 Male, age 74, both hemispheres 45.9
2045 Male, age 76, both hemispheres 44.6
2749 Male, age 80, left hemisphere 41.5
1873 Female, age 85, both hemispheres 41.3
Hippocampus, CA2
nTPM: 39.3
2113 Female, age 91, right hemisphere 46.4
2249 Male, age 74, both hemispheres 44.3
1940 Female, age 85, left hemisphere 40.4
1892 Male, age 76, both hemispheres 36.3
1963 Male, age 80, left hemisphere 34.9
2437 Female, age 94, left hemisphere 33.5
Hippocampus, CA3
nTPM: 42.9
2137 Male, age 80, left hemisphere 54.0
2620 Female, age 94, left hemisphere 46.1
2436 Male, age 74, both hemispheres 43.3
1891 Female, age 85, both hemispheres 41.4
2861 Female, age 67, both hemispheres 39.8
1867 Male, age 76, both hemispheres 32.9
Parahippocampal cortex
nTPM: 44.8
2622 Female, age 67, right hemisphere 55.9
2693 Female, age 94, both hemispheres 52.0
2250 Female, age 67, right hemisphere 46.7
2245 Female, age 91, both hemispheres 45.5
1933 Female, age 85, both hemispheres 45.3
2692 Male, age 74, both hemispheres 45.2
1850 Male, age 80, both hemispheres 43.6
2532 Female, age 72, left hemisphere 41.2
1990 Female, age 91, right hemisphere 39.1
2018 Male, age 76, both hemispheres 33.8
Perirhinal gyrus
nTPM: 44.0
2848 Male, age 76, right hemisphere 50.8
2521 Female, age 94, right hemisphere 48.7
1841 Female, age 85, right hemisphere 43.5
1794 Male, age 80, right hemisphere 38.8
1847 Female, age 91, left hemisphere 38.5
Subiculum
nTPM: 39.6
2619 Male, age 74, both hemispheres 42.9
2729 Female, age 91, right hemisphere 41.0
1977 Female, age 85, both hemispheres 40.2
1901 Male, age 80, both hemispheres 40.1
2438 Female, age 94, left hemisphere 38.6
2042 Male, age 76, both hemispheres 34.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 2.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 2.3
Samples: 197

Max nTPM: 16.3
Min nTPM: 0.6
Std nTPM: 1.3
Median nTPM: 2.1
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 16.3
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 8.1
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 5.4
GTEX-1212Z-0011-R1b-SM-5BC72 60-69 years, male 5.1
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 5.1
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 4.3
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 4.2
GTEX-11GSO-0011-R1b-SM-57WD3 60-69 years, male 4.0
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 3.8
GTEX-13G51-0011-R1a-SM-5LZYR 60-69 years, male 3.8
GTEX-QVJO-0011-R1A-SM-2S1QI 60-69 years, female 3.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 49.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 49.1
FF:10169-103B7 60 years, female 68.5
FF:10153-102I9 76 years, female 29.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 12.7
Pig sample Sample description nTPM
Subiculum
nTPM: 10.8
Samples: 4

Max nTPM: 11.6
Min nTPM: 9.9
Sample A Female 9.9
Sample B Female 11.1
Sample C Male 10.7
Sample D Male 11.6
Dorsal hippocampus
nTPM: 12.7
Samples: 4

Max nTPM: 15.4
Min nTPM: 11.2
Sample A Female 11.2
Sample B Female 12.5
Sample C Male 11.7
Sample D Male 15.4
Entorhinal cortex
nTPM: 12.0
Samples: 4

Max nTPM: 13.2
Min nTPM: 10.4
Sample A Female 10.4
Sample B Female 12.3
Sample C Male 13.2
Sample D Male 11.9
Ventral hippocampus
nTPM: 11.2
Samples: 4

Max nTPM: 12.3
Min nTPM: 9.2
Sample A Female 10.9
Sample B Female 12.3
Sample C Male 9.2
Sample D Male 12.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 3.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 3.8
Samples: 4

Max nTPM: 4.0
Min nTPM: 3.5
Sample A Male 3.5
Sample B Male 3.8
Sample C Female 4.0
Sample D Female 3.7
Hippocampal formation
nTPM: 3.5
Samples: 4

Max nTPM: 4.0
Min nTPM: 2.9
Sample A Male 3.3
Sample B Male 3.6
Sample C Female 2.9
Sample D Female 4.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.8
73514803 Antisense, RP_051121_03_B06, Mouse strain C57BL/6J (56 days, male) 0.8

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