HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:39.8 nTPM
HPA Brain:19.6 nTPM
GTEx:39.8 nTPM
FANTOM5:46.8 Scaled Tags Per Million
Pig:3.4 nTPM
Mouse:3.3 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA003506Antibody HPA053314Antibody CAB037206
Glial cells HighNot detectedLow
Neuronal cells LowNot detectedNot detected







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 19.6
Sample id Sample description nTPM
Hippocampus
nTPM: 18.7
2529 Female, age 94, left hemisphere 23.2
1855 Male, age 76, left hemisphere 18.1
2148 Female, age 91, left hemisphere 18.1
1898 Male, age 80, left hemisphere 17.9
2621 Female, age 67, right hemisphere 17.8
1911 Female, age 85, right hemisphere 17.1
Dentate gyrus
nTPM: 16.5
2010 Male, age 76, both hemispheres 23.7
2531 Female, age 67, both hemispheres 16.9
2246 Female, age 85, both hemispheres 15.8
2528 Male, age 74, both hemispheres 15.5
2530 Female, age 94, left hemisphere 14.0
1927 Female, age 91, both hemispheres 13.2
Entorhinal gyrus
nTPM: 17.7
2686 Male, age 75, right hemisphere 23.3
1787 Male, age 76, left hemisphere 20.0
2117 Female, age 91, right hemisphere 17.9
1938 Female, age 85, left hemisphere 16.2
2764 Male, age 80, right hemisphere 15.7
2613 Female, age 94, left hemisphere 13.0
Hippocampus, CA1
nTPM: 15.3
2045 Male, age 76, both hemispheres 17.8
2082 Female, age 91, right hemisphere 17.6
2527 Male, age 74, both hemispheres 16.6
1873 Female, age 85, both hemispheres 15.9
2749 Male, age 80, left hemisphere 8.6
Hippocampus, CA2
nTPM: 16.6
2113 Female, age 91, right hemisphere 20.1
1940 Female, age 85, left hemisphere 20.0
2249 Male, age 74, both hemispheres 16.5
2437 Female, age 94, left hemisphere 16.5
1892 Male, age 76, both hemispheres 14.3
1963 Male, age 80, left hemisphere 12.5
Hippocampus, CA3
nTPM: 16.4
1867 Male, age 76, both hemispheres 20.5
2861 Female, age 67, both hemispheres 17.2
2436 Male, age 74, both hemispheres 17.0
1891 Female, age 85, both hemispheres 16.5
2620 Female, age 94, left hemisphere 15.9
2137 Male, age 80, left hemisphere 11.3
Parahippocampal cortex
nTPM: 19.0
2018 Male, age 76, both hemispheres 25.2
2532 Female, age 72, left hemisphere 22.9
2622 Female, age 67, right hemisphere 20.4
2245 Female, age 91, both hemispheres 19.9
1990 Female, age 91, right hemisphere 17.6
2250 Female, age 67, right hemisphere 17.5
2692 Male, age 74, both hemispheres 17.2
1850 Male, age 80, both hemispheres 16.8
1933 Female, age 85, both hemispheres 16.5
2693 Female, age 94, both hemispheres 16.0
Perirhinal gyrus
nTPM: 17.8
1841 Female, age 85, right hemisphere 21.5
1794 Male, age 80, right hemisphere 18.9
1847 Female, age 91, left hemisphere 16.3
2848 Male, age 76, right hemisphere 16.2
2521 Female, age 94, right hemisphere 16.1
Subiculum
nTPM: 19.6
2438 Female, age 94, left hemisphere 25.5
2042 Male, age 76, both hemispheres 24.6
2619 Male, age 74, both hemispheres 18.4
1901 Male, age 80, both hemispheres 16.7
1977 Female, age 85, both hemispheres 16.4
2729 Female, age 91, right hemisphere 16.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 39.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 39.8
Samples: 197

Max nTPM: 198.7
Min nTPM: 15.8
Std nTPM: 22.1
Median nTPM: 33.4
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 198.7
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 127.6
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 118.4
GTEX-13FHO-0011-R1b-SM-5KLZG 60-69 years, male 112.9
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 112.8
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 99.7
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 94.7
GTEX-TSE9-0011-R1A-SM-3DB7E 60-69 years, female 88.8
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 88.5
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 86.0
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 82.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 46.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 46.8
FF:10153-102I9 76 years, female 47.0
FF:10169-103B7 60 years, female 46.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 3.4
Pig sample Sample description nTPM
Subiculum
nTPM: 2.7
Samples: 4

Max nTPM: 3.2
Min nTPM: 2.2
Sample A Female 3.2
Sample B Female 2.9
Sample C Male 2.4
Sample D Male 2.2
Dorsal hippocampus
nTPM: 3.4
Samples: 4

Max nTPM: 4.6
Min nTPM: 2.3
Sample A Female 4.6
Sample B Female 3.0
Sample C Male 3.5
Sample D Male 2.3
Entorhinal cortex
nTPM: 2.0
Samples: 4

Max nTPM: 2.3
Min nTPM: 1.5
Sample A Female 1.9
Sample B Female 2.3
Sample C Male 2.3
Sample D Male 1.5
Ventral hippocampus
nTPM: 3.0
Samples: 4

Max nTPM: 3.5
Min nTPM: 2.5
Sample A Female 3.5
Sample B Female 3.1
Sample C Male 2.8
Sample D Male 2.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 3.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 3.1
Samples: 4

Max nTPM: 3.6
Min nTPM: 2.6
Sample A Male 3.1
Sample B Male 3.0
Sample C Female 3.6
Sample D Female 2.6
Hippocampal formation
nTPM: 3.3
Samples: 4

Max nTPM: 4.0
Min nTPM: 2.9
Sample A Male 2.9
Sample B Male 3.0
Sample C Female 3.4
Sample D Female 4.0

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