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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
267.2
nTPM
Monaco:
250.3
nTPM
Schmiedel:
376.0
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
267.2
HPA sample
nTPM
gdT-cell nTPM: 94.4
Samples: 6
Max nTPM: 106.8
Min nTPM: 65.0
P10809_1007
65.0
P10809_1022
91.6
P10809_1041
102.9
P10809_1060
106.8
P10809_1077
99.9
P10809_1098
99.9
MAIT T-cell nTPM: 86.4
Samples: 6
Max nTPM: 112.1
Min nTPM: 54.8
P10809_1006
54.8
P10809_1024
112.1
P10809_1043
72.0
P10809_1062
93.1
P10809_1083
88.8
P10809_1097
97.6
Memory CD4 T-cell nTPM: 138.2
Samples: 6
Max nTPM: 152.7
Min nTPM: 116.2
P10809_1014
116.2
P10809_1026
149.8
P10809_1045
131.0
P10809_1064
152.7
P10809_1086
136.2
P10809_1113
143.3
Memory CD8 T-cell nTPM: 131.2
Samples: 5
Max nTPM: 215.7
Min nTPM: 88.9
P10809_1012
107.2
P10809_1027
215.7
P10809_1046
88.9
P10809_1065
122.4
P10809_1111
121.6
Naive CD4 T-cell nTPM: 88.7
Samples: 6
Max nTPM: 112.2
Min nTPM: 73.5
P10809_1015
73.5
P10809_1030
112.2
P10809_1049
104.6
P10809_1068
86.6
P10809_1085
73.9
P10809_1112
81.4
Naive CD8 T-cell nTPM: 85.6
Samples: 6
Max nTPM: 113.0
Min nTPM: 63.7
P10809_1016
63.7
P10809_1031
87.5
P10809_1050
76.3
P10809_1069
104.0
P10809_1087
113.0
P10809_1110
69.0
T-reg nTPM: 267.2
Samples: 6
Max nTPM: 339.8
Min nTPM: 209.0
P10809_1018
339.8
P10809_1037
318.6
P10809_1056
220.0
P10809_1075
276.2
P10809_1094
209.0
P10809_1106
239.4
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
250.3
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 164.5
Samples: 4
Max nTPM: 248.7
Min nTPM: 105.8
RHH5202_R3573
192.5
RHH5230_R3602
105.8
RHH5259_R3631
111.0
RHH5288_R3660
248.7
Effector memory CD8 T-cell nTPM: 246.7
Samples: 4
Max nTPM: 400.3
Min nTPM: 153.1
RHH5203_R3574
400.3
RHH5231_R3603
265.4
RHH5260_R3632
153.1
RHH5289_R3661
167.8
MAIT T-cell nTPM: 133.3
Samples: 4
Max nTPM: 171.0
Min nTPM: 92.1
RHH5233_R3605
171.0
RHH5205_R3576
92.1
RHH5262_R3634
139.1
RHH5297_R3663
131.0
Memory CD4 T-cell TFH nTPM: 250.3
Samples: 4
Max nTPM: 305.7
Min nTPM: 224.4
RHH5300_R3666
226.5
RHH5236_R3608
244.5
RHH5265_R3637
224.4
RHH5208_R3579
305.7
Memory CD4 T-cell Th1 nTPM: 213.3
Samples: 4
Max nTPM: 326.5
Min nTPM: 168.4
RHH5210_R3581
171.2
RHH5302_R3668
326.5
RHH5238_R3610
168.4
RHH5267_R3639
187.0
Memory CD4 T-cell Th1/Th17 nTPM: 202.7
Samples: 4
Max nTPM: 280.1
Min nTPM: 97.9
RHH5303_R3669
277.8
RHH5211_R3582
280.1
RHH5239_R3611
97.9
RHH5268_R3640
155.1
Memory CD4 T-cell Th17 nTPM: 129.8
Samples: 4
Max nTPM: 192.9
Min nTPM: 86.9
RHH5304_R3670
137.9
RHH5212_R3583
192.9
RHH5240_R3612
101.5
RHH5269_R3641
86.9
Memory CD4 T-cell Th2 nTPM: 178.0
Samples: 4
Max nTPM: 252.2
Min nTPM: 114.9
RHH5305_R3671
166.1
RHH5213_R3584
178.8
RHH5241_R3613
252.2
RHH5270_R3642
114.9
Naive CD4 T-cell nTPM: 111.9
Samples: 4
Max nTPM: 135.8
Min nTPM: 79.7
RHH5306_R3672
119.9
RHH5214_R3585
135.8
RHH5242_R3614
112.0
RHH5271_R3643
79.7
Naive CD8 T-cell nTPM: 70.3
Samples: 4
Max nTPM: 93.3
Min nTPM: 40.5
RHH5201_R3572
78.1
RHH5229_R3601
40.5
RHH5258_R3630
93.3
RHH5287_R3659
69.2
Non-Vd2 gdTCR nTPM: 168.3
Samples: 4
Max nTPM: 229.0
Min nTPM: 110.4
RHH5235_R3607
110.4
RHH5264_R3636
229.0
RHH5207_R3578
173.4
RHH5299_R3665
160.2
T-reg nTPM: 238.8
Samples: 4
Max nTPM: 314.5
Min nTPM: 151.1
RHH5301_R3667
314.5
RHH5237_R3609
288.5
RHH5266_R3638
151.1
RHH5209_R3580
201.2
Terminal effector memory CD4 T-cell nTPM: 178.0
Samples: 2
Max nTPM: 253.8
Min nTPM: 102.1
RHH5243_R3615
102.1
RHH5272_R3644
253.8
Terminal effector memory CD8 T-cell nTPM: 183.9
Samples: 4
Max nTPM: 233.3
Min nTPM: 139.5
RHH5232_R3604
214.2
RHH5204_R3575
233.3
RHH5261_R3633
148.7
RHH5296_R3662
139.5
Vd2 gdTCR nTPM: 170.6
Samples: 4
Max nTPM: 244.2
Min nTPM: 105.1
RHH5234_R3606
152.4
RHH5206_R3577
244.2
RHH5263_R3635
105.1
RHH5298_R3664
180.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
