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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
28.4
nTPM
Monaco:
24.4
nTPM
Schmiedel:
31.3
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
28.4
HPA sample
nTPM
gdT-cell nTPM: 18.3
Samples: 6
Max nTPM: 25.7
Min nTPM: 7.1
P10809_1007
16.3
P10809_1022
15.1
P10809_1041
7.1
P10809_1060
25.7
P10809_1077
24.2
P10809_1098
21.5
MAIT T-cell nTPM: 24.2
Samples: 6
Max nTPM: 39.4
Min nTPM: 13.9
P10809_1006
13.9
P10809_1024
19.0
P10809_1043
16.9
P10809_1062
25.1
P10809_1083
39.4
P10809_1097
30.9
Memory CD4 T-cell nTPM: 23.9
Samples: 6
Max nTPM: 37.6
Min nTPM: 12.0
P10809_1014
21.8
P10809_1026
14.6
P10809_1045
12.0
P10809_1064
32.9
P10809_1086
37.6
P10809_1113
24.5
Memory CD8 T-cell nTPM: 21.7
Samples: 5
Max nTPM: 35.5
Min nTPM: 9.3
P10809_1012
9.3
P10809_1027
32.2
P10809_1046
12.2
P10809_1065
35.5
P10809_1111
19.1
Naive CD4 T-cell nTPM: 26.7
Samples: 6
Max nTPM: 33.9
Min nTPM: 16.4
P10809_1015
30.7
P10809_1030
16.4
P10809_1049
21.7
P10809_1068
33.8
P10809_1085
33.9
P10809_1112
23.5
Naive CD8 T-cell nTPM: 24.2
Samples: 6
Max nTPM: 37.0
Min nTPM: 14.9
P10809_1016
27.0
P10809_1031
14.9
P10809_1050
22.1
P10809_1069
22.3
P10809_1087
37.0
P10809_1110
21.6
T-reg nTPM: 28.4
Samples: 6
Max nTPM: 34.2
Min nTPM: 8.1
P10809_1018
29.6
P10809_1037
8.1
P10809_1056
34.2
P10809_1075
32.7
P10809_1094
32.7
P10809_1106
33.0
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
24.4
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 10.9
Samples: 4
Max nTPM: 15.4
Min nTPM: 5.4
RHH5202_R3573
15.4
RHH5230_R3602
5.4
RHH5259_R3631
13.0
RHH5288_R3660
9.7
Effector memory CD8 T-cell nTPM: 13.8
Samples: 4
Max nTPM: 20.3
Min nTPM: 9.1
RHH5203_R3574
9.1
RHH5231_R3603
13.4
RHH5260_R3632
20.3
RHH5289_R3661
12.4
MAIT T-cell nTPM: 23.0
Samples: 4
Max nTPM: 31.3
Min nTPM: 15.4
RHH5233_R3605
26.3
RHH5205_R3576
18.9
RHH5262_R3634
15.4
RHH5297_R3663
31.3
Memory CD4 T-cell TFH nTPM: 16.7
Samples: 4
Max nTPM: 23.0
Min nTPM: 7.8
RHH5300_R3666
15.3
RHH5236_R3608
20.7
RHH5265_R3637
7.8
RHH5208_R3579
23.0
Memory CD4 T-cell Th1 nTPM: 15.5
Samples: 4
Max nTPM: 22.4
Min nTPM: 9.9
RHH5210_R3581
10.4
RHH5302_R3668
19.3
RHH5238_R3610
22.4
RHH5267_R3639
9.9
Memory CD4 T-cell Th1/Th17 nTPM: 17.8
Samples: 4
Max nTPM: 23.6
Min nTPM: 11.4
RHH5303_R3669
23.6
RHH5211_R3582
14.2
RHH5239_R3611
21.8
RHH5268_R3640
11.4
Memory CD4 T-cell Th17 nTPM: 13.9
Samples: 4
Max nTPM: 28.2
Min nTPM: 4.6
RHH5304_R3670
17.2
RHH5212_R3583
28.2
RHH5240_R3612
4.6
RHH5269_R3641
5.4
Memory CD4 T-cell Th2 nTPM: 18.9
Samples: 4
Max nTPM: 28.8
Min nTPM: 9.3
RHH5305_R3671
28.8
RHH5213_R3584
21.5
RHH5241_R3613
9.3
RHH5270_R3642
15.9
Naive CD4 T-cell nTPM: 14.4
Samples: 4
Max nTPM: 22.1
Min nTPM: 7.3
RHH5306_R3672
22.1
RHH5214_R3585
16.1
RHH5242_R3614
7.3
RHH5271_R3643
12.2
Naive CD8 T-cell nTPM: 13.8
Samples: 4
Max nTPM: 18.6
Min nTPM: 7.2
RHH5201_R3572
7.2
RHH5229_R3601
18.6
RHH5258_R3630
14.9
RHH5287_R3659
14.5
Non-Vd2 gdTCR nTPM: 16.9
Samples: 4
Max nTPM: 26.8
Min nTPM: 8.7
RHH5235_R3607
17.9
RHH5264_R3636
8.7
RHH5207_R3578
14.0
RHH5299_R3665
26.8
T-reg nTPM: 13.1
Samples: 4
Max nTPM: 19.4
Min nTPM: 6.6
RHH5301_R3667
11.4
RHH5237_R3609
15.1
RHH5266_R3638
6.6
RHH5209_R3580
19.4
Terminal effector memory CD4 T-cell nTPM: 9.8
Samples: 2
Max nTPM: 11.0
Min nTPM: 8.6
RHH5243_R3615
11.0
RHH5272_R3644
8.6
Terminal effector memory CD8 T-cell nTPM: 13.2
Samples: 4
Max nTPM: 17.9
Min nTPM: 8.4
RHH5232_R3604
17.9
RHH5204_R3575
17.2
RHH5261_R3633
8.4
RHH5296_R3662
9.3
Vd2 gdTCR nTPM: 24.4
Samples: 4
Max nTPM: 36.8
Min nTPM: 12.5
RHH5234_R3606
12.5
RHH5206_R3577
36.8
RHH5263_R3635
25.0
RHH5298_R3664
23.1
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
