HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:17.2 nTPM
HPA Brain:28.3 nTPM
GTEx:17.2 nTPM
FANTOM5:27.5 Scaled Tags Per Million
Pig:22.2 nTPM
Mouse:12.5 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA036337
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 28.3
Sample id Sample description nTPM
Hippocampus
nTPM: 23.2
2529 Female, age 94, left hemisphere 30.4
1911 Female, age 85, right hemisphere 27.4
1898 Male, age 80, left hemisphere 23.0
2621 Female, age 67, right hemisphere 21.2
2148 Female, age 91, left hemisphere 18.5
1855 Male, age 76, left hemisphere 18.4
Dentate gyrus
nTPM: 24.5
2530 Female, age 94, left hemisphere 37.5
2531 Female, age 67, both hemispheres 24.8
2528 Male, age 74, both hemispheres 23.8
2246 Female, age 85, both hemispheres 21.3
2010 Male, age 76, both hemispheres 21.0
1927 Female, age 91, both hemispheres 18.7
Entorhinal gyrus
nTPM: 23.5
2686 Male, age 75, right hemisphere 30.8
2613 Female, age 94, left hemisphere 25.2
1938 Female, age 85, left hemisphere 22.5
2117 Female, age 91, right hemisphere 21.6
1787 Male, age 76, left hemisphere 20.8
2764 Male, age 80, right hemisphere 19.8
Hippocampus, CA1
nTPM: 21.4
2527 Male, age 74, both hemispheres 26.2
2082 Female, age 91, right hemisphere 23.7
1873 Female, age 85, both hemispheres 20.8
2749 Male, age 80, left hemisphere 20.6
2045 Male, age 76, both hemispheres 15.7
Hippocampus, CA2
nTPM: 27.9
2437 Female, age 94, left hemisphere 36.5
1963 Male, age 80, left hemisphere 31.2
2249 Male, age 74, both hemispheres 30.8
2113 Female, age 91, right hemisphere 26.8
1940 Female, age 85, left hemisphere 22.6
1892 Male, age 76, both hemispheres 19.5
Hippocampus, CA3
nTPM: 28.3
2436 Male, age 74, both hemispheres 35.0
2861 Female, age 67, both hemispheres 32.6
1891 Female, age 85, both hemispheres 28.3
2137 Male, age 80, left hemisphere 27.9
1867 Male, age 76, both hemispheres 25.0
2620 Female, age 94, left hemisphere 21.3
Parahippocampal cortex
nTPM: 22.7
2018 Male, age 76, both hemispheres 25.3
2692 Male, age 74, both hemispheres 25.0
1933 Female, age 85, both hemispheres 24.2
2693 Female, age 94, both hemispheres 24.1
1850 Male, age 80, both hemispheres 24.0
2532 Female, age 72, left hemisphere 22.8
1990 Female, age 91, right hemisphere 22.2
2245 Female, age 91, both hemispheres 21.8
2622 Female, age 67, right hemisphere 19.5
2250 Female, age 67, right hemisphere 18.0
Perirhinal gyrus
nTPM: 20.5
2848 Male, age 76, right hemisphere 22.5
1841 Female, age 85, right hemisphere 22.0
2521 Female, age 94, right hemisphere 20.3
1847 Female, age 91, left hemisphere 18.8
1794 Male, age 80, right hemisphere 18.7
Subiculum
nTPM: 26.0
2042 Male, age 76, both hemispheres 33.8
1901 Male, age 80, both hemispheres 27.1
2619 Male, age 74, both hemispheres 25.6
1977 Female, age 85, both hemispheres 25.3
2438 Female, age 94, left hemisphere 23.0
2729 Female, age 91, right hemisphere 20.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 17.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 17.2
Samples: 197

Max nTPM: 85.9
Min nTPM: 2.8
Std nTPM: 11.8
Median nTPM: 13.8
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 85.9
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 61.3
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 58.8
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 51.4
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 48.9
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 48.2
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 47.1
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 46.6
GTEX-183WM-0011-R1a-SM-718A8 70-79 years, female 45.5
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 41.6
GTEX-1E2YA-0011-R1b-SM-CJI29 50-59 years, male 41.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 27.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 27.5
FF:10153-102I9 76 years, female 29.2
FF:10169-103B7 60 years, female 25.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 22.2
Pig sample Sample description nTPM
Subiculum
nTPM: 17.3
Samples: 4

Max nTPM: 20.3
Min nTPM: 10.8
Sample A Female 10.8
Sample B Female 20.1
Sample C Male 18.1
Sample D Male 20.3
Dorsal hippocampus
nTPM: 22.3
Samples: 4

Max nTPM: 29.4
Min nTPM: 17.4
Sample A Female 22.5
Sample B Female 19.7
Sample C Male 29.4
Sample D Male 17.4
Entorhinal cortex
nTPM: 16.3
Samples: 4

Max nTPM: 19.3
Min nTPM: 15.1
Sample A Female 15.1
Sample B Female 15.5
Sample C Male 15.3
Sample D Male 19.3
Ventral hippocampus
nTPM: 19.0
Samples: 4

Max nTPM: 22.3
Min nTPM: 13.4
Sample A Female 21.7
Sample B Female 18.7
Sample C Male 13.4
Sample D Male 22.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 12.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 5.5
Samples: 4

Max nTPM: 8.6
Min nTPM: 2.7
Sample A Male 8.6
Sample B Male 5.2
Sample C Female 5.5
Sample D Female 2.7
Hippocampal formation
nTPM: 12.5
Samples: 4

Max nTPM: 17.2
Min nTPM: 6.6
Sample A Male 6.6
Sample B Male 11.5
Sample C Female 17.2
Sample D Female 14.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
71487106 Antisense, RP_050913_01_C05, Mouse strain C57BL/6J (56 days, male) 0.1

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