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RANBP3L
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  • RANBP3L
PROTEIN SUMMARY SECTION OVERVIEW GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

RANBP3L
Synonyms FLJ25422
Gene descriptioni

Full gene name according to HGNC.

RAN binding protein 3 like
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 5
Cytoband p13.2
Chromosome location (bp) 36246913 - 36302114
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

4
Ensembl ENSG00000164188 (version 109)
Entrez gene 202151
HGNC HGNC:26353
UniProt Q86VV4 (UniProt - Evidence at protein level)
neXtProt NX_Q86VV4
GeneCards RANBP3L
Antibodypedia RANBP3L antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Nuclear export factor for BMP-specific SMAD1/5/8 that plays a critical role in terminating BMP signaling and regulating mesenchymal stem cell differentiation by blocking osteoblast differentiation to promote myogenic differention. Directly recognizes dephosphorylated SMAD1/5/8 and mediates their nuclear export in a Ran-dependent manner.... show less
Gene summary (Entrez)i

Useful information about the gene from Entrez

Enables SMAD binding activity. Predicted to be involved in several processes, including mesenchymal cell differentiation involved in bone development; negative regulation of osteoblast differentiation; and positive regulation of myoblast differentiation. Predicted to be part of nuclear pore. Predicted to be active in cytoplasm. [provided by Alliance of Genome Resources, Apr 2022]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The ENSP identifier links to the Ensembl website protein summary, while the ENST identifier links to the Ensembl website transcript summary for the selected splice variant. The data in the UniProt column can be expanded to show links to all matching UniProt identifiers for this protein.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The Gene Ontology terms assigned to this protein are listed if expanding the Gene ontology column. The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide (according to a majority of the signal peptide predictors SPOCTOPUS, SignalP 4.0, and Phobius) and the number of predicted transmembrane region(s) (according to MDM) are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
RANBP3L-201
ENSP00000296604
ENST00000296604
Q86VV4
[Direct mapping] Ran-binding protein 3-like
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Show all
GO:0005096 [GTPase activator activity]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005643 [nuclear pore]
GO:0005737 [cytoplasm]
GO:0006611 [protein export from nucleus]
GO:0045663 [positive regulation of myoblast differentiation]
GO:0045668 [negative regulation of osteoblast differentiation]
GO:0046332 [SMAD binding]
GO:0046907 [intracellular transport]
GO:1901706 [mesenchymal cell differentiation involved in bone development]
Show all
465 aa
52.2 kDa
No 0
RANBP3L-202
ENSP00000421853
ENST00000502994
Q86VV4
[Direct mapping] Ran-binding protein 3-like
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Show all
GO:0005096 [GTPase activator activity]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005643 [nuclear pore]
GO:0005737 [cytoplasm]
GO:0006611 [protein export from nucleus]
GO:0045663 [positive regulation of myoblast differentiation]
GO:0045668 [negative regulation of osteoblast differentiation]
GO:0046332 [SMAD binding]
GO:0046907 [intracellular transport]
GO:1901706 [mesenchymal cell differentiation involved in bone development]
Show all
490 aa
54.9 kDa
No 0
RANBP3L-203
ENSP00000427147
ENST00000505865
D6RCM9
[Direct mapping] Ran-binding protein 3-like
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Show all
108 aa
12.2 kDa
No 0
RANBP3L-204
ENSP00000421149
ENST00000515759
Q86VV4
[Direct mapping] Ran-binding protein 3-like
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Show all
GO:0005096 [GTPase activator activity]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005643 [nuclear pore]
GO:0005737 [cytoplasm]
GO:0006611 [protein export from nucleus]
GO:0045663 [positive regulation of myoblast differentiation]
GO:0045668 [negative regulation of osteoblast differentiation]
GO:0046332 [SMAD binding]
GO:0046907 [intracellular transport]
GO:1901706 [mesenchymal cell differentiation involved in bone development]
Show all
321 aa
35.7 kDa
No 0

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