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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
72.6
nTPM
Monaco:
28.2
nTPM
Schmiedel:
66.2
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
72.6
HPA sample
nTPM
gdT-cell nTPM: 49.2
Samples: 6
Max nTPM: 62.9
Min nTPM: 38.9
P10809_1007
51.8
P10809_1022
39.3
P10809_1041
51.2
P10809_1060
38.9
P10809_1077
62.9
P10809_1098
51.3
MAIT T-cell nTPM: 55.4
Samples: 6
Max nTPM: 71.1
Min nTPM: 41.8
P10809_1006
52.7
P10809_1024
63.3
P10809_1043
45.6
P10809_1062
41.8
P10809_1083
71.1
P10809_1097
58.1
Memory CD4 T-cell nTPM: 62.2
Samples: 6
Max nTPM: 77.7
Min nTPM: 50.6
P10809_1014
64.4
P10809_1026
77.7
P10809_1045
50.6
P10809_1064
53.0
P10809_1086
67.5
P10809_1113
59.7
Memory CD8 T-cell nTPM: 58.0
Samples: 5
Max nTPM: 71.3
Min nTPM: 44.8
P10809_1012
50.7
P10809_1027
71.3
P10809_1046
59.8
P10809_1065
44.8
P10809_1111
63.3
Naive CD4 T-cell nTPM: 68.5
Samples: 6
Max nTPM: 83.8
Min nTPM: 61.8
P10809_1015
63.5
P10809_1030
83.8
P10809_1049
61.8
P10809_1068
66.8
P10809_1085
72.0
P10809_1112
62.9
Naive CD8 T-cell nTPM: 70.2
Samples: 6
Max nTPM: 101.4
Min nTPM: 52.7
P10809_1016
67.5
P10809_1031
101.4
P10809_1050
52.7
P10809_1069
65.8
P10809_1087
71.6
P10809_1110
62.3
T-reg nTPM: 72.6
Samples: 6
Max nTPM: 94.0
Min nTPM: 57.9
P10809_1018
72.2
P10809_1037
94.0
P10809_1056
61.6
P10809_1075
57.9
P10809_1094
70.7
P10809_1106
79.2
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
28.2
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 16.9
Samples: 4
Max nTPM: 31.7
Min nTPM: 4.8
RHH5202_R3573
4.8
RHH5230_R3602
16.9
RHH5259_R3631
31.7
RHH5288_R3660
14.0
Effector memory CD8 T-cell nTPM: 13.5
Samples: 4
Max nTPM: 22.6
Min nTPM: 1.3
RHH5203_R3574
14.2
RHH5231_R3603
16.0
RHH5260_R3632
22.6
RHH5289_R3661
1.3
MAIT T-cell nTPM: 21.2
Samples: 4
Max nTPM: 28.0
Min nTPM: 8.4
RHH5233_R3605
8.4
RHH5205_R3576
21.3
RHH5262_R3634
27.0
RHH5297_R3663
28.0
Memory CD4 T-cell TFH nTPM: 22.0
Samples: 4
Max nTPM: 32.4
Min nTPM: 13.7
RHH5300_R3666
15.0
RHH5236_R3608
26.7
RHH5265_R3637
13.7
RHH5208_R3579
32.4
Memory CD4 T-cell Th1 nTPM: 26.5
Samples: 4
Max nTPM: 50.6
Min nTPM: 4.8
RHH5210_R3581
4.8
RHH5302_R3668
50.6
RHH5238_R3610
38.1
RHH5267_R3639
12.6
Memory CD4 T-cell Th1/Th17 nTPM: 18.2
Samples: 4
Max nTPM: 22.0
Min nTPM: 15.2
RHH5303_R3669
18.2
RHH5211_R3582
22.0
RHH5239_R3611
17.2
RHH5268_R3640
15.2
Memory CD4 T-cell Th17 nTPM: 12.9
Samples: 4
Max nTPM: 18.0
Min nTPM: 10.6
RHH5304_R3670
18.0
RHH5212_R3583
10.7
RHH5240_R3612
10.6
RHH5269_R3641
12.4
Memory CD4 T-cell Th2 nTPM: 24.4
Samples: 4
Max nTPM: 33.3
Min nTPM: 16.9
RHH5305_R3671
22.8
RHH5213_R3584
24.7
RHH5241_R3613
33.3
RHH5270_R3642
16.9
Naive CD4 T-cell nTPM: 23.9
Samples: 4
Max nTPM: 42.5
Min nTPM: 8.8
RHH5306_R3672
27.1
RHH5214_R3585
42.5
RHH5242_R3614
17.1
RHH5271_R3643
8.8
Naive CD8 T-cell nTPM: 27.9
Samples: 4
Max nTPM: 34.0
Min nTPM: 15.8
RHH5201_R3572
27.6
RHH5229_R3601
15.8
RHH5258_R3630
34.0
RHH5287_R3659
34.0
Non-Vd2 gdTCR nTPM: 27.1
Samples: 4
Max nTPM: 34.5
Min nTPM: 22.1
RHH5235_R3607
22.1
RHH5264_R3636
28.0
RHH5207_R3578
23.9
RHH5299_R3665
34.5
T-reg nTPM: 19.6
Samples: 4
Max nTPM: 27.9
Min nTPM: 15.1
RHH5301_R3667
16.8
RHH5237_R3609
18.5
RHH5266_R3638
15.1
RHH5209_R3580
27.9
Terminal effector memory CD4 T-cell nTPM: 9.9
Samples: 2
Max nTPM: 15.2
Min nTPM: 4.6
RHH5243_R3615
15.2
RHH5272_R3644
4.6
Terminal effector memory CD8 T-cell nTPM: 25.4
Samples: 4
Max nTPM: 43.4
Min nTPM: 10.4
RHH5232_R3604
14.0
RHH5204_R3575
43.4
RHH5261_R3633
33.7
RHH5296_R3662
10.4
Vd2 gdTCR nTPM: 28.2
Samples: 4
Max nTPM: 43.9
Min nTPM: 14.3
RHH5234_R3606
14.3
RHH5206_R3577
43.9
RHH5263_R3635
28.1
RHH5298_R3664
26.4
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
