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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
22.6
nTPM
Monaco:
152.1
nTPM
Schmiedel:
109.6
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
22.6
HPA sample
nTPM
gdT-cell nTPM: 22.6
Samples: 6
Max nTPM: 42.4
Min nTPM: 13.7
P10809_1007
27.2
P10809_1022
16.3
P10809_1041
42.4
P10809_1060
18.9
P10809_1077
17.0
P10809_1098
13.7
MAIT T-cell nTPM: 20.3
Samples: 6
Max nTPM: 38.1
Min nTPM: 7.0
P10809_1006
38.1
P10809_1024
17.5
P10809_1043
20.6
P10809_1062
21.5
P10809_1083
7.0
P10809_1097
17.0
Memory CD4 T-cell nTPM: 19.2
Samples: 6
Max nTPM: 24.2
Min nTPM: 13.5
P10809_1014
24.2
P10809_1026
23.3
P10809_1045
20.9
P10809_1064
15.7
P10809_1086
17.8
P10809_1113
13.5
Memory CD8 T-cell nTPM: 19.1
Samples: 5
Max nTPM: 26.0
Min nTPM: 13.4
P10809_1012
26.0
P10809_1027
19.4
P10809_1046
20.8
P10809_1065
15.9
P10809_1111
13.4
Naive CD4 T-cell nTPM: 22.3
Samples: 6
Max nTPM: 28.5
Min nTPM: 17.3
P10809_1015
25.0
P10809_1030
17.4
P10809_1049
28.5
P10809_1068
22.7
P10809_1085
22.8
P10809_1112
17.3
Naive CD8 T-cell nTPM: 18.2
Samples: 6
Max nTPM: 26.7
Min nTPM: 11.8
P10809_1016
26.7
P10809_1031
11.8
P10809_1050
21.3
P10809_1069
15.3
P10809_1087
18.3
P10809_1110
15.5
T-reg nTPM: 13.9
Samples: 6
Max nTPM: 20.8
Min nTPM: 6.2
P10809_1018
20.0
P10809_1037
6.2
P10809_1056
20.8
P10809_1075
11.7
P10809_1094
15.3
P10809_1106
9.2
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
152.1
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 111.9
Samples: 4
Max nTPM: 150.2
Min nTPM: 62.9
RHH5202_R3573
150.2
RHH5230_R3602
106.5
RHH5259_R3631
127.8
RHH5288_R3660
62.9
Effector memory CD8 T-cell nTPM: 113.1
Samples: 4
Max nTPM: 144.9
Min nTPM: 65.1
RHH5203_R3574
144.9
RHH5231_R3603
124.2
RHH5260_R3632
118.0
RHH5289_R3661
65.1
MAIT T-cell nTPM: 137.0
Samples: 4
Max nTPM: 197.3
Min nTPM: 84.7
RHH5233_R3605
133.6
RHH5205_R3576
197.3
RHH5262_R3634
132.3
RHH5297_R3663
84.7
Memory CD4 T-cell TFH nTPM: 93.5
Samples: 4
Max nTPM: 136.6
Min nTPM: 49.7
RHH5300_R3666
49.7
RHH5236_R3608
94.5
RHH5265_R3637
93.1
RHH5208_R3579
136.6
Memory CD4 T-cell Th1 nTPM: 117.4
Samples: 4
Max nTPM: 154.8
Min nTPM: 57.5
RHH5210_R3581
149.5
RHH5302_R3668
57.5
RHH5238_R3610
154.8
RHH5267_R3639
107.7
Memory CD4 T-cell Th1/Th17 nTPM: 128.6
Samples: 4
Max nTPM: 175.7
Min nTPM: 65.7
RHH5303_R3669
65.7
RHH5211_R3582
175.7
RHH5239_R3611
172.2
RHH5268_R3640
100.6
Memory CD4 T-cell Th17 nTPM: 113.3
Samples: 4
Max nTPM: 147.0
Min nTPM: 63.8
RHH5304_R3670
63.8
RHH5212_R3583
144.0
RHH5240_R3612
147.0
RHH5269_R3641
98.2
Memory CD4 T-cell Th2 nTPM: 96.8
Samples: 4
Max nTPM: 130.6
Min nTPM: 50.1
RHH5305_R3671
50.1
RHH5213_R3584
130.6
RHH5241_R3613
109.2
RHH5270_R3642
97.3
Naive CD4 T-cell nTPM: 106.1
Samples: 4
Max nTPM: 139.7
Min nTPM: 65.2
RHH5306_R3672
65.2
RHH5214_R3585
108.6
RHH5242_R3614
139.7
RHH5271_R3643
110.8
Naive CD8 T-cell nTPM: 121.8
Samples: 4
Max nTPM: 183.7
Min nTPM: 59.5
RHH5201_R3572
137.3
RHH5229_R3601
183.7
RHH5258_R3630
106.6
RHH5287_R3659
59.5
Non-Vd2 gdTCR nTPM: 117.8
Samples: 4
Max nTPM: 158.0
Min nTPM: 67.1
RHH5235_R3607
158.0
RHH5264_R3636
109.5
RHH5207_R3578
136.6
RHH5299_R3665
67.1
T-reg nTPM: 84.0
Samples: 4
Max nTPM: 124.8
Min nTPM: 45.5
RHH5301_R3667
45.5
RHH5237_R3609
90.0
RHH5266_R3638
75.6
RHH5209_R3580
124.8
Terminal effector memory CD4 T-cell nTPM: 152.2
Samples: 2
Max nTPM: 177.8
Min nTPM: 126.5
RHH5243_R3615
177.8
RHH5272_R3644
126.5
Terminal effector memory CD8 T-cell nTPM: 119.1
Samples: 4
Max nTPM: 156.3
Min nTPM: 69.3
RHH5232_R3604
143.7
RHH5204_R3575
106.9
RHH5261_R3633
156.3
RHH5296_R3662
69.3
Vd2 gdTCR nTPM: 126.3
Samples: 4
Max nTPM: 180.4
Min nTPM: 54.0
RHH5234_R3606
135.0
RHH5206_R3577
180.4
RHH5263_R3635
135.6
RHH5298_R3664
54.0
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
