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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
327.2
nTPM
Monaco:
29.9
nTPM
Schmiedel:
120.0
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
327.2
HPA sample
nTPM
gdT-cell nTPM: 246.4
Samples: 6
Max nTPM: 285.4
Min nTPM: 184.8
P10809_1007
184.8
P10809_1022
257.4
P10809_1041
285.4
P10809_1060
216.0
P10809_1077
262.9
P10809_1098
271.7
MAIT T-cell nTPM: 252.6
Samples: 6
Max nTPM: 338.0
Min nTPM: 148.6
P10809_1006
148.6
P10809_1024
208.8
P10809_1043
338.0
P10809_1062
260.7
P10809_1083
274.6
P10809_1097
284.6
Memory CD4 T-cell nTPM: 281.3
Samples: 6
Max nTPM: 302.3
Min nTPM: 192.8
P10809_1014
192.8
P10809_1026
302.3
P10809_1045
298.4
P10809_1064
291.1
P10809_1086
302.1
P10809_1113
300.9
Memory CD8 T-cell nTPM: 280.4
Samples: 5
Max nTPM: 322.1
Min nTPM: 169.5
P10809_1012
169.5
P10809_1027
305.2
P10809_1046
322.1
P10809_1065
302.9
P10809_1111
302.2
Naive CD4 T-cell nTPM: 274.6
Samples: 6
Max nTPM: 423.1
Min nTPM: 160.5
P10809_1015
160.5
P10809_1030
286.2
P10809_1049
423.1
P10809_1068
272.0
P10809_1085
255.8
P10809_1112
249.7
Naive CD8 T-cell nTPM: 264.5
Samples: 6
Max nTPM: 306.2
Min nTPM: 197.6
P10809_1016
197.6
P10809_1031
266.9
P10809_1050
300.7
P10809_1069
282.0
P10809_1087
306.2
P10809_1110
233.6
T-reg nTPM: 327.2
Samples: 6
Max nTPM: 432.6
Min nTPM: 182.1
P10809_1018
182.1
P10809_1037
333.7
P10809_1056
432.6
P10809_1075
327.9
P10809_1094
316.7
P10809_1106
370.2
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
29.9
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 24.6
Samples: 4
Max nTPM: 44.2
Min nTPM: 14.5
RHH5202_R3573
14.6
RHH5230_R3602
25.1
RHH5259_R3631
44.2
RHH5288_R3660
14.5
Effector memory CD8 T-cell nTPM: 13.9
Samples: 4
Max nTPM: 24.1
Min nTPM: 7.5
RHH5203_R3574
14.2
RHH5231_R3603
7.5
RHH5260_R3632
24.1
RHH5289_R3661
9.8
MAIT T-cell nTPM: 20.7
Samples: 4
Max nTPM: 27.0
Min nTPM: 14.5
RHH5233_R3605
14.5
RHH5205_R3576
21.8
RHH5262_R3634
27.0
RHH5297_R3663
19.4
Memory CD4 T-cell TFH nTPM: 20.5
Samples: 4
Max nTPM: 28.6
Min nTPM: 12.1
RHH5300_R3666
12.1
RHH5236_R3608
28.6
RHH5265_R3637
20.0
RHH5208_R3579
21.3
Memory CD4 T-cell Th1 nTPM: 27.9
Samples: 4
Max nTPM: 50.3
Min nTPM: 11.3
RHH5210_R3581
11.3
RHH5302_R3668
16.2
RHH5238_R3610
50.3
RHH5267_R3639
33.8
Memory CD4 T-cell Th1/Th17 nTPM: 26.9
Samples: 4
Max nTPM: 39.5
Min nTPM: 13.9
RHH5303_R3669
13.9
RHH5211_R3582
17.9
RHH5239_R3611
39.5
RHH5268_R3640
36.2
Memory CD4 T-cell Th17 nTPM: 23.9
Samples: 4
Max nTPM: 33.3
Min nTPM: 12.6
RHH5304_R3670
20.5
RHH5212_R3583
12.6
RHH5240_R3612
33.3
RHH5269_R3641
29.2
Memory CD4 T-cell Th2 nTPM: 16.6
Samples: 4
Max nTPM: 22.1
Min nTPM: 13.8
RHH5305_R3671
15.4
RHH5213_R3584
15.2
RHH5241_R3613
22.1
RHH5270_R3642
13.8
Naive CD4 T-cell nTPM: 14.3
Samples: 4
Max nTPM: 19.2
Min nTPM: 8.4
RHH5306_R3672
8.4
RHH5214_R3585
14.3
RHH5242_R3614
15.1
RHH5271_R3643
19.2
Naive CD8 T-cell nTPM: 26.8
Samples: 4
Max nTPM: 47.4
Min nTPM: 15.0
RHH5201_R3572
15.0
RHH5229_R3601
47.4
RHH5258_R3630
24.6
RHH5287_R3659
20.1
Non-Vd2 gdTCR nTPM: 25.5
Samples: 4
Max nTPM: 36.4
Min nTPM: 12.9
RHH5235_R3607
36.4
RHH5264_R3636
35.0
RHH5207_R3578
17.5
RHH5299_R3665
12.9
T-reg nTPM: 22.6
Samples: 4
Max nTPM: 35.8
Min nTPM: 8.9
RHH5301_R3667
8.9
RHH5237_R3609
23.4
RHH5266_R3638
35.8
RHH5209_R3580
22.4
Terminal effector memory CD4 T-cell nTPM: 21.7
Samples: 2
Max nTPM: 27.5
Min nTPM: 15.9
RHH5243_R3615
27.5
RHH5272_R3644
15.9
Terminal effector memory CD8 T-cell nTPM: 30.0
Samples: 4
Max nTPM: 52.9
Min nTPM: 19.3
RHH5232_R3604
19.7
RHH5204_R3575
27.9
RHH5261_R3633
52.9
RHH5296_R3662
19.3
Vd2 gdTCR nTPM: 23.7
Samples: 4
Max nTPM: 35.6
Min nTPM: 13.8
RHH5234_R3606
14.9
RHH5206_R3577
35.6
RHH5263_R3635
30.5
RHH5298_R3664
13.8
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
