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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
114.1
nTPM
Monaco:
449.2
nTPM
Schmiedel:
54.0
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
114.1
HPA sample
nTPM
gdT-cell nTPM: 114.1
Samples: 6
Max nTPM: 143.3
Min nTPM: 89.9
P10809_1007
99.7
P10809_1022
140.6
P10809_1041
89.9
P10809_1060
104.9
P10809_1077
106.0
P10809_1098
143.3
MAIT T-cell nTPM: 90.2
Samples: 6
Max nTPM: 114.2
Min nTPM: 66.9
P10809_1006
114.2
P10809_1024
106.5
P10809_1043
74.1
P10809_1062
84.5
P10809_1083
66.9
P10809_1097
94.8
Memory CD4 T-cell nTPM: 39.9
Samples: 6
Max nTPM: 63.9
Min nTPM: 21.0
P10809_1014
28.2
P10809_1026
21.0
P10809_1045
34.6
P10809_1064
60.0
P10809_1086
63.9
P10809_1113
31.6
Memory CD8 T-cell nTPM: 102.1
Samples: 5
Max nTPM: 129.8
Min nTPM: 79.7
P10809_1012
79.7
P10809_1027
119.6
P10809_1046
89.0
P10809_1065
92.6
P10809_1111
129.8
Naive CD4 T-cell nTPM: 28.9
Samples: 6
Max nTPM: 35.6
Min nTPM: 24.4
P10809_1015
24.7
P10809_1030
24.4
P10809_1049
35.6
P10809_1068
31.0
P10809_1085
31.6
P10809_1112
26.0
Naive CD8 T-cell nTPM: 69.2
Samples: 6
Max nTPM: 124.5
Min nTPM: 23.0
P10809_1016
23.0
P10809_1031
69.4
P10809_1050
61.8
P10809_1069
93.6
P10809_1087
124.5
P10809_1110
42.6
T-reg nTPM: 41.8
Samples: 6
Max nTPM: 64.2
Min nTPM: 29.9
P10809_1018
39.0
P10809_1037
64.2
P10809_1056
29.9
P10809_1075
36.7
P10809_1094
33.2
P10809_1106
47.8
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
449.2
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 167.2
Samples: 4
Max nTPM: 201.9
Min nTPM: 139.6
RHH5202_R3573
149.0
RHH5230_R3602
201.9
RHH5259_R3631
178.2
RHH5288_R3660
139.6
Effector memory CD8 T-cell nTPM: 449.2
Samples: 4
Max nTPM: 474.0
Min nTPM: 413.2
RHH5203_R3574
470.8
RHH5231_R3603
438.9
RHH5260_R3632
413.2
RHH5289_R3661
474.0
MAIT T-cell nTPM: 297.4
Samples: 4
Max nTPM: 343.1
Min nTPM: 260.7
RHH5233_R3605
269.1
RHH5205_R3576
343.1
RHH5262_R3634
316.5
RHH5297_R3663
260.7
Memory CD4 T-cell TFH nTPM: 30.6
Samples: 4
Max nTPM: 38.1
Min nTPM: 22.3
RHH5300_R3666
24.2
RHH5236_R3608
37.6
RHH5265_R3637
38.1
RHH5208_R3579
22.3
Memory CD4 T-cell Th1 nTPM: 160.7
Samples: 4
Max nTPM: 184.9
Min nTPM: 124.5
RHH5210_R3581
151.4
RHH5302_R3668
124.5
RHH5238_R3610
184.9
RHH5267_R3639
182.0
Memory CD4 T-cell Th1/Th17 nTPM: 168.6
Samples: 4
Max nTPM: 195.2
Min nTPM: 137.7
RHH5303_R3669
195.2
RHH5211_R3582
191.1
RHH5239_R3611
137.7
RHH5268_R3640
150.4
Memory CD4 T-cell Th17 nTPM: 65.6
Samples: 4
Max nTPM: 115.8
Min nTPM: 39.9
RHH5304_R3670
115.8
RHH5212_R3583
54.4
RHH5240_R3612
39.9
RHH5269_R3641
52.2
Memory CD4 T-cell Th2 nTPM: 89.4
Samples: 4
Max nTPM: 110.9
Min nTPM: 63.5
RHH5305_R3671
95.6
RHH5213_R3584
110.9
RHH5241_R3613
63.5
RHH5270_R3642
87.7
Naive CD4 T-cell nTPM: 97.3
Samples: 4
Max nTPM: 113.7
Min nTPM: 87.9
RHH5306_R3672
99.2
RHH5214_R3585
87.9
RHH5242_R3614
88.5
RHH5271_R3643
113.7
Naive CD8 T-cell nTPM: 115.6
Samples: 4
Max nTPM: 138.5
Min nTPM: 81.0
RHH5201_R3572
81.0
RHH5229_R3601
123.8
RHH5258_R3630
118.9
RHH5287_R3659
138.5
Non-Vd2 gdTCR nTPM: 419.9
Samples: 4
Max nTPM: 508.8
Min nTPM: 339.7
RHH5235_R3607
462.2
RHH5264_R3636
508.8
RHH5207_R3578
368.7
RHH5299_R3665
339.7
T-reg nTPM: 76.4
Samples: 4
Max nTPM: 102.2
Min nTPM: 62.0
RHH5301_R3667
69.8
RHH5237_R3609
102.2
RHH5266_R3638
71.4
RHH5209_R3580
62.0
Terminal effector memory CD4 T-cell nTPM: 424.7
Samples: 2
Max nTPM: 499.8
Min nTPM: 349.6
RHH5243_R3615
499.8
RHH5272_R3644
349.6
Terminal effector memory CD8 T-cell nTPM: 437.1
Samples: 4
Max nTPM: 503.4
Min nTPM: 369.1
RHH5232_R3604
497.2
RHH5204_R3575
369.1
RHH5261_R3633
503.4
RHH5296_R3662
378.6
Vd2 gdTCR nTPM: 407.7
Samples: 4
Max nTPM: 499.5
Min nTPM: 274.6
RHH5234_R3606
414.4
RHH5206_R3577
499.5
RHH5263_R3635
442.2
RHH5298_R3664
274.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
