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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
16839.5
nTPM
Monaco:
1631.3
nTPM
Schmiedel:
1406.3
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
16839.5
HPA sample
nTPM
gdT-cell nTPM: 6826.5
Samples: 6
Max nTPM: 8341.5
Min nTPM: 4877.8
P10809_1007
6574.2
P10809_1022
7306.9
P10809_1041
8341.5
P10809_1060
4877.8
P10809_1077
6550.7
P10809_1098
7307.8
MAIT T-cell nTPM: 9644.9
Samples: 6
Max nTPM: 11942.1
Min nTPM: 5766.7
P10809_1006
5766.7
P10809_1024
10564.0
P10809_1043
11473.8
P10809_1062
9975.6
P10809_1083
8147.3
P10809_1097
11942.1
Memory CD4 T-cell nTPM: 11414.4
Samples: 6
Max nTPM: 13948.9
Min nTPM: 9448.0
P10809_1014
10518.1
P10809_1026
13948.9
P10809_1045
13094.7
P10809_1064
10381.6
P10809_1086
9448.0
P10809_1113
11095.0
Memory CD8 T-cell nTPM: 8380.6
Samples: 5
Max nTPM: 10497.8
Min nTPM: 7246.0
P10809_1012
7246.0
P10809_1027
8366.8
P10809_1046
10497.8
P10809_1065
7811.8
P10809_1111
7980.7
Naive CD4 T-cell nTPM: 16839.5
Samples: 6
Max nTPM: 25404.9
Min nTPM: 12944.0
P10809_1015
12944.0
P10809_1030
18920.7
P10809_1049
25404.9
P10809_1068
16228.7
P10809_1085
13301.7
P10809_1112
14236.9
Naive CD8 T-cell nTPM: 11741.9
Samples: 6
Max nTPM: 13808.7
Min nTPM: 7717.9
P10809_1016
13808.7
P10809_1031
13201.6
P10809_1050
13074.4
P10809_1069
10934.7
P10809_1087
7717.9
P10809_1110
11714.3
T-reg nTPM: 8049.2
Samples: 6
Max nTPM: 12720.7
Min nTPM: 5360.7
P10809_1018
5360.7
P10809_1037
7972.2
P10809_1056
12720.7
P10809_1075
7658.0
P10809_1094
7966.6
P10809_1106
6617.0
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
1631.3
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 1072.5
Samples: 4
Max nTPM: 1742.2
Min nTPM: 467.0
RHH5202_R3573
467.0
RHH5230_R3602
1301.7
RHH5259_R3631
1742.2
RHH5288_R3660
778.9
Effector memory CD8 T-cell nTPM: 527.8
Samples: 4
Max nTPM: 1068.1
Min nTPM: 291.0
RHH5203_R3574
291.0
RHH5231_R3603
438.6
RHH5260_R3632
1068.1
RHH5289_R3661
313.4
MAIT T-cell nTPM: 795.6
Samples: 4
Max nTPM: 1061.0
Min nTPM: 512.3
RHH5233_R3605
512.3
RHH5205_R3576
929.3
RHH5262_R3634
1061.0
RHH5297_R3663
679.6
Memory CD4 T-cell TFH nTPM: 907.0
Samples: 4
Max nTPM: 1755.5
Min nTPM: 538.3
RHH5300_R3666
597.0
RHH5236_R3608
1755.5
RHH5265_R3637
737.0
RHH5208_R3579
538.3
Memory CD4 T-cell Th1 nTPM: 1280.1
Samples: 4
Max nTPM: 2069.5
Min nTPM: 536.2
RHH5210_R3581
536.2
RHH5302_R3668
1074.7
RHH5238_R3610
2069.5
RHH5267_R3639
1440.0
Memory CD4 T-cell Th1/Th17 nTPM: 1171.8
Samples: 4
Max nTPM: 1690.8
Min nTPM: 675.6
RHH5303_R3669
904.8
RHH5211_R3582
675.6
RHH5239_R3611
1416.1
RHH5268_R3640
1690.8
Memory CD4 T-cell Th17 nTPM: 1140.3
Samples: 4
Max nTPM: 1407.7
Min nTPM: 673.0
RHH5304_R3670
1407.7
RHH5212_R3583
673.0
RHH5240_R3612
1383.6
RHH5269_R3641
1096.9
Memory CD4 T-cell Th2 nTPM: 1013.5
Samples: 4
Max nTPM: 1402.8
Min nTPM: 822.5
RHH5305_R3671
1402.8
RHH5213_R3584
822.5
RHH5241_R3613
879.5
RHH5270_R3642
949.0
Naive CD4 T-cell nTPM: 1631.3
Samples: 4
Max nTPM: 2150.8
Min nTPM: 1083.3
RHH5306_R3672
1712.5
RHH5214_R3585
2150.8
RHH5242_R3614
1083.3
RHH5271_R3643
1578.4
Naive CD8 T-cell nTPM: 1411.5
Samples: 4
Max nTPM: 2265.4
Min nTPM: 670.4
RHH5201_R3572
670.4
RHH5229_R3601
2265.4
RHH5258_R3630
997.9
RHH5287_R3659
1712.3
Non-Vd2 gdTCR nTPM: 603.5
Samples: 4
Max nTPM: 894.0
Min nTPM: 393.8
RHH5235_R3607
894.0
RHH5264_R3636
651.6
RHH5207_R3578
393.8
RHH5299_R3665
474.6
T-reg nTPM: 1110.1
Samples: 4
Max nTPM: 1264.1
Min nTPM: 873.2
RHH5301_R3667
873.2
RHH5237_R3609
1054.0
RHH5266_R3638
1264.1
RHH5209_R3580
1249.0
Terminal effector memory CD4 T-cell nTPM: 741.8
Samples: 2
Max nTPM: 897.0
Min nTPM: 586.5
RHH5243_R3615
897.0
RHH5272_R3644
586.5
Terminal effector memory CD8 T-cell nTPM: 797.0
Samples: 4
Max nTPM: 1345.0
Min nTPM: 307.7
RHH5232_R3604
307.7
RHH5204_R3575
1107.5
RHH5261_R3633
1345.0
RHH5296_R3662
427.6
Vd2 gdTCR nTPM: 1271.9
Samples: 4
Max nTPM: 1865.1
Min nTPM: 820.9
RHH5234_R3606
820.9
RHH5206_R3577
1865.1
RHH5263_R3635
1489.1
RHH5298_R3664
912.4
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.