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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
18.8
nTPM
Monaco:
17.5
nTPM
Schmiedel:
42.8
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
18.8
HPA sample
nTPM
gdT-cell nTPM: 15.2
Samples: 6
Max nTPM: 19.1
Min nTPM: 13.0
P10809_1007
13.7
P10809_1022
15.6
P10809_1041
16.1
P10809_1060
13.0
P10809_1077
19.1
P10809_1098
13.4
MAIT T-cell nTPM: 14.0
Samples: 6
Max nTPM: 19.8
Min nTPM: 9.1
P10809_1006
10.8
P10809_1024
9.9
P10809_1043
19.1
P10809_1062
9.1
P10809_1083
19.8
P10809_1097
15.2
Memory CD4 T-cell nTPM: 16.2
Samples: 6
Max nTPM: 23.0
Min nTPM: 10.0
P10809_1014
12.5
P10809_1026
23.0
P10809_1045
21.1
P10809_1064
19.4
P10809_1086
10.0
P10809_1113
11.4
Memory CD8 T-cell nTPM: 17.2
Samples: 5
Max nTPM: 22.5
Min nTPM: 14.3
P10809_1012
14.3
P10809_1027
17.0
P10809_1046
22.5
P10809_1065
17.9
P10809_1111
14.4
Naive CD4 T-cell nTPM: 18.8
Samples: 6
Max nTPM: 27.8
Min nTPM: 14.7
P10809_1015
17.9
P10809_1030
14.7
P10809_1049
27.8
P10809_1068
16.8
P10809_1085
19.8
P10809_1112
15.6
Naive CD8 T-cell nTPM: 17.8
Samples: 6
Max nTPM: 22.8
Min nTPM: 9.6
P10809_1016
14.0
P10809_1031
22.3
P10809_1050
22.8
P10809_1069
18.1
P10809_1087
9.6
P10809_1110
19.8
T-reg nTPM: 15.8
Samples: 6
Max nTPM: 31.7
Min nTPM: 8.9
P10809_1018
10.2
P10809_1037
12.9
P10809_1056
31.7
P10809_1075
14.3
P10809_1094
8.9
P10809_1106
16.9
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
17.5
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 10.4
Samples: 4
Max nTPM: 15.8
Min nTPM: 2.1
RHH5202_R3573
2.1
RHH5230_R3602
9.0
RHH5259_R3631
14.8
RHH5288_R3660
15.8
Effector memory CD8 T-cell nTPM: 12.5
Samples: 4
Max nTPM: 21.6
Min nTPM: 7.0
RHH5203_R3574
8.7
RHH5231_R3603
21.6
RHH5260_R3632
12.7
RHH5289_R3661
7.0
MAIT T-cell nTPM: 12.7
Samples: 4
Max nTPM: 18.3
Min nTPM: 8.6
RHH5233_R3605
9.4
RHH5205_R3576
8.6
RHH5262_R3634
18.3
RHH5297_R3663
14.5
Memory CD4 T-cell TFH nTPM: 11.5
Samples: 4
Max nTPM: 19.5
Min nTPM: 3.0
RHH5300_R3666
19.5
RHH5236_R3608
17.2
RHH5265_R3637
6.1
RHH5208_R3579
3.0
Memory CD4 T-cell Th1 nTPM: 11.7
Samples: 4
Max nTPM: 13.3
Min nTPM: 8.5
RHH5210_R3581
13.3
RHH5302_R3668
12.1
RHH5238_R3610
8.5
RHH5267_R3639
13.0
Memory CD4 T-cell Th1/Th17 nTPM: 9.3
Samples: 4
Max nTPM: 15.5
Min nTPM: 5.3
RHH5303_R3669
5.3
RHH5211_R3582
15.5
RHH5239_R3611
7.4
RHH5268_R3640
8.9
Memory CD4 T-cell Th17 nTPM: 11.2
Samples: 4
Max nTPM: 19.9
Min nTPM: 3.7
RHH5304_R3670
9.2
RHH5212_R3583
19.9
RHH5240_R3612
3.7
RHH5269_R3641
11.9
Memory CD4 T-cell Th2 nTPM: 13.0
Samples: 4
Max nTPM: 20.3
Min nTPM: 4.5
RHH5305_R3671
20.3
RHH5213_R3584
18.2
RHH5241_R3613
4.5
RHH5270_R3642
8.8
Naive CD4 T-cell nTPM: 13.8
Samples: 4
Max nTPM: 18.8
Min nTPM: 10.3
RHH5306_R3672
18.8
RHH5214_R3585
15.5
RHH5242_R3614
10.4
RHH5271_R3643
10.3
Naive CD8 T-cell nTPM: 6.6
Samples: 4
Max nTPM: 10.3
Min nTPM: 3.7
RHH5201_R3572
5.0
RHH5229_R3601
7.5
RHH5258_R3630
3.7
RHH5287_R3659
10.3
Non-Vd2 gdTCR nTPM: 11.4
Samples: 4
Max nTPM: 19.0
Min nTPM: 8.1
RHH5235_R3607
9.1
RHH5264_R3636
9.4
RHH5207_R3578
8.1
RHH5299_R3665
19.0
T-reg nTPM: 15.3
Samples: 4
Max nTPM: 24.1
Min nTPM: 8.1
RHH5301_R3667
18.7
RHH5237_R3609
24.1
RHH5266_R3638
8.1
RHH5209_R3580
10.4
Terminal effector memory CD4 T-cell nTPM: 6.0
Samples: 2
Max nTPM: 9.5
Min nTPM: 2.5
RHH5243_R3615
2.5
RHH5272_R3644
9.5
Terminal effector memory CD8 T-cell nTPM: 9.5
Samples: 4
Max nTPM: 14.3
Min nTPM: 3.4
RHH5232_R3604
8.4
RHH5204_R3575
11.7
RHH5261_R3633
14.3
RHH5296_R3662
3.4
Vd2 gdTCR nTPM: 17.5
Samples: 4
Max nTPM: 27.7
Min nTPM: 12.2
RHH5234_R3606
17.5
RHH5206_R3577
27.7
RHH5263_R3635
12.4
RHH5298_R3664
12.2
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
