HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:126.5 nTPM
HPA Brain:75.9 nTPM
GTEx:126.5 nTPM
FANTOM5:62.3 Scaled Tags Per Million
Pig:15.9 nTPM
Mouse:328.8 nTPM
Allen mouse:5.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA051895Antibody CAB017831Antibody CAB040577
Glial cells Not detectedNot detectedLow
Neuronal cells Not detectedNot detectedLow







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 75.9
Sample id Sample description nTPM
Hippocampus
nTPM: 61.0
1898 Male, age 80, left hemisphere 79.4
2621 Female, age 67, right hemisphere 63.6
1855 Male, age 76, left hemisphere 62.2
1911 Female, age 85, right hemisphere 61.1
2148 Female, age 91, left hemisphere 51.8
2529 Female, age 94, left hemisphere 47.9
Dentate gyrus
nTPM: 66.9
2010 Male, age 76, both hemispheres 86.4
2528 Male, age 74, both hemispheres 71.5
2246 Female, age 85, both hemispheres 68.1
2531 Female, age 67, both hemispheres 59.7
1927 Female, age 91, both hemispheres 59.5
2530 Female, age 94, left hemisphere 56.1
Entorhinal gyrus
nTPM: 45.5
1938 Female, age 85, left hemisphere 54.7
2117 Female, age 91, right hemisphere 50.0
1787 Male, age 76, left hemisphere 47.7
2686 Male, age 75, right hemisphere 46.1
2764 Male, age 80, right hemisphere 38.4
2613 Female, age 94, left hemisphere 36.3
Hippocampus, CA1
nTPM: 55.5
1873 Female, age 85, both hemispheres 70.1
2527 Male, age 74, both hemispheres 61.4
2045 Male, age 76, both hemispheres 53.5
2749 Male, age 80, left hemisphere 48.9
2082 Female, age 91, right hemisphere 43.7
Hippocampus, CA2
nTPM: 66.5
2249 Male, age 74, both hemispheres 150.6
1940 Female, age 85, left hemisphere 62.4
2437 Female, age 94, left hemisphere 57.4
1892 Male, age 76, both hemispheres 47.2
2113 Female, age 91, right hemisphere 42.7
1963 Male, age 80, left hemisphere 38.5
Hippocampus, CA3
nTPM: 75.9
2436 Male, age 74, both hemispheres 213.6
1891 Female, age 85, both hemispheres 55.5
1867 Male, age 76, both hemispheres 54.8
2620 Female, age 94, left hemisphere 44.8
2861 Female, age 67, both hemispheres 44.3
2137 Male, age 80, left hemisphere 42.2
Parahippocampal cortex
nTPM: 45.4
2250 Female, age 67, right hemisphere 60.3
2018 Male, age 76, both hemispheres 59.2
2245 Female, age 91, both hemispheres 53.2
1933 Female, age 85, both hemispheres 51.3
1850 Male, age 80, both hemispheres 48.2
1990 Female, age 91, right hemisphere 40.1
2693 Female, age 94, both hemispheres 39.9
2532 Female, age 72, left hemisphere 36.3
2692 Male, age 74, both hemispheres 35.6
2622 Female, age 67, right hemisphere 30.0
Perirhinal gyrus
nTPM: 41.9
2521 Female, age 94, right hemisphere 49.7
1847 Female, age 91, left hemisphere 42.3
1841 Female, age 85, right hemisphere 41.4
1794 Male, age 80, right hemisphere 38.1
2848 Male, age 76, right hemisphere 38.1
Subiculum
nTPM: 51.0
2042 Male, age 76, both hemispheres 69.9
2729 Female, age 91, right hemisphere 51.8
1977 Female, age 85, both hemispheres 51.3
1901 Male, age 80, both hemispheres 47.7
2619 Male, age 74, both hemispheres 43.9
2438 Female, age 94, left hemisphere 41.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 126.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 126.5
Samples: 197

Max nTPM: 913.3
Min nTPM: 43.1
Std nTPM: 91.4
Median nTPM: 105.4
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 913.3
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 513.3
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 508.0
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 471.5
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 464.5
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 361.2
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 337.7
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 316.5
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 307.6
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 274.9
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 263.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 62.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 62.3
FF:10169-103B7 60 years, female 67.5
FF:10153-102I9 76 years, female 57.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 15.9
Pig sample Sample description nTPM
Subiculum
nTPM: 7.0
Samples: 4

Max nTPM: 8.8
Min nTPM: 5.3
Sample A Female 8.8
Sample B Female 5.3
Sample C Male 5.8
Sample D Male 8.2
Dorsal hippocampus
nTPM: 15.9
Samples: 4

Max nTPM: 21.5
Min nTPM: 13.3
Sample A Female 21.5
Sample B Female 15.3
Sample C Male 13.4
Sample D Male 13.3
Entorhinal cortex
nTPM: 10.8
Samples: 4

Max nTPM: 12.8
Min nTPM: 8.3
Sample A Female 10.8
Sample B Female 12.8
Sample C Male 11.3
Sample D Male 8.3
Ventral hippocampus
nTPM: 12.9
Samples: 4

Max nTPM: 15.3
Min nTPM: 7.1
Sample A Female 15.3
Sample B Female 7.1
Sample C Male 14.3
Sample D Male 14.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 328.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 310.0
Samples: 4

Max nTPM: 345.2
Min nTPM: 285.1
Sample A Male 308.2
Sample B Male 285.1
Sample C Female 345.2
Sample D Female 301.4
Hippocampal formation
nTPM: 328.9
Samples: 4

Max nTPM: 388.2
Min nTPM: 296.8
Sample A Male 388.2
Sample B Male 296.8
Sample C Female 306.8
Sample D Female 323.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 5.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.5
70634396 Antisense, RP_050725_01_F09, Mouse strain C57BL/6J (56 days, male) 9.7
631728 Antisense, RP_040907_01_C08, Mouse strain C57BL/6J (56 days, male) 1.3

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