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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
74.1
nTPM
Monaco:
588.9
nTPM
Schmiedel:
645.3
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
74.1
HPA sample
nTPM
gdT-cell nTPM: 55.0
Samples: 6
Max nTPM: 87.1
Min nTPM: 37.5
P10809_1007
45.9
P10809_1022
87.1
P10809_1041
61.6
P10809_1060
55.6
P10809_1077
42.1
P10809_1098
37.5
MAIT T-cell nTPM: 62.7
Samples: 6
Max nTPM: 93.7
Min nTPM: 42.3
P10809_1006
73.3
P10809_1024
93.7
P10809_1043
55.9
P10809_1062
57.3
P10809_1083
42.3
P10809_1097
53.7
Memory CD4 T-cell nTPM: 74.2
Samples: 6
Max nTPM: 90.7
Min nTPM: 56.3
P10809_1014
90.7
P10809_1026
71.3
P10809_1045
86.1
P10809_1064
63.4
P10809_1086
56.3
P10809_1113
77.1
Memory CD8 T-cell nTPM: 64.6
Samples: 5
Max nTPM: 80.2
Min nTPM: 49.9
P10809_1012
80.2
P10809_1027
67.3
P10809_1046
64.6
P10809_1065
61.1
P10809_1111
49.9
Naive CD4 T-cell nTPM: 57.1
Samples: 6
Max nTPM: 75.1
Min nTPM: 42.6
P10809_1015
71.2
P10809_1030
53.3
P10809_1049
42.8
P10809_1068
75.1
P10809_1085
42.6
P10809_1112
57.3
Naive CD8 T-cell nTPM: 41.0
Samples: 6
Max nTPM: 52.0
Min nTPM: 28.3
P10809_1016
43.8
P10809_1031
40.5
P10809_1050
40.0
P10809_1069
52.0
P10809_1087
41.2
P10809_1110
28.3
T-reg nTPM: 57.7
Samples: 6
Max nTPM: 74.9
Min nTPM: 38.0
P10809_1018
74.9
P10809_1037
64.3
P10809_1056
55.4
P10809_1075
59.1
P10809_1094
54.5
P10809_1106
38.0
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
588.9
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 469.2
Samples: 4
Max nTPM: 497.6
Min nTPM: 411.1
RHH5202_R3573
497.6
RHH5230_R3602
482.6
RHH5259_R3631
485.3
RHH5288_R3660
411.1
Effector memory CD8 T-cell nTPM: 312.6
Samples: 4
Max nTPM: 348.0
Min nTPM: 263.3
RHH5203_R3574
311.2
RHH5231_R3603
263.3
RHH5260_R3632
348.0
RHH5289_R3661
327.9
MAIT T-cell nTPM: 422.7
Samples: 4
Max nTPM: 557.0
Min nTPM: 320.7
RHH5233_R3605
432.7
RHH5205_R3576
557.0
RHH5262_R3634
380.4
RHH5297_R3663
320.7
Memory CD4 T-cell TFH nTPM: 502.0
Samples: 4
Max nTPM: 546.5
Min nTPM: 483.9
RHH5300_R3666
492.6
RHH5236_R3608
546.5
RHH5265_R3637
483.9
RHH5208_R3579
485.1
Memory CD4 T-cell Th1 nTPM: 443.4
Samples: 4
Max nTPM: 453.6
Min nTPM: 431.8
RHH5210_R3581
446.5
RHH5302_R3668
441.7
RHH5238_R3610
453.6
RHH5267_R3639
431.8
Memory CD4 T-cell Th1/Th17 nTPM: 588.9
Samples: 4
Max nTPM: 682.5
Min nTPM: 470.9
RHH5303_R3669
599.4
RHH5211_R3582
602.9
RHH5239_R3611
682.5
RHH5268_R3640
470.9
Memory CD4 T-cell Th17 nTPM: 554.3
Samples: 4
Max nTPM: 660.7
Min nTPM: 486.9
RHH5304_R3670
559.2
RHH5212_R3583
486.9
RHH5240_R3612
660.7
RHH5269_R3641
510.4
Memory CD4 T-cell Th2 nTPM: 462.9
Samples: 4
Max nTPM: 513.9
Min nTPM: 431.7
RHH5305_R3671
431.7
RHH5213_R3584
450.3
RHH5241_R3613
513.9
RHH5270_R3642
455.7
Naive CD4 T-cell nTPM: 389.6
Samples: 4
Max nTPM: 451.6
Min nTPM: 333.1
RHH5306_R3672
399.8
RHH5214_R3585
333.1
RHH5242_R3614
373.9
RHH5271_R3643
451.6
Naive CD8 T-cell nTPM: 279.9
Samples: 4
Max nTPM: 308.4
Min nTPM: 236.0
RHH5201_R3572
308.4
RHH5229_R3601
307.6
RHH5258_R3630
236.0
RHH5287_R3659
267.7
Non-Vd2 gdTCR nTPM: 231.7
Samples: 4
Max nTPM: 275.6
Min nTPM: 189.2
RHH5235_R3607
266.8
RHH5264_R3636
195.0
RHH5207_R3578
275.6
RHH5299_R3665
189.2
T-reg nTPM: 418.5
Samples: 4
Max nTPM: 488.2
Min nTPM: 380.8
RHH5301_R3667
380.8
RHH5237_R3609
488.2
RHH5266_R3638
422.7
RHH5209_R3580
382.2
Terminal effector memory CD4 T-cell nTPM: 333.4
Samples: 2
Max nTPM: 377.3
Min nTPM: 289.5
RHH5243_R3615
289.5
RHH5272_R3644
377.3
Terminal effector memory CD8 T-cell nTPM: 259.9
Samples: 4
Max nTPM: 324.8
Min nTPM: 181.1
RHH5232_R3604
238.3
RHH5204_R3575
181.1
RHH5261_R3633
324.8
RHH5296_R3662
295.4
Vd2 gdTCR nTPM: 310.2
Samples: 4
Max nTPM: 339.8
Min nTPM: 278.7
RHH5234_R3606
339.8
RHH5206_R3577
283.9
RHH5263_R3635
338.5
RHH5298_R3664
278.7
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
