HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:48.9 nTPM
HPA Brain:54.9 nTPM
GTEx:48.9 nTPM
FANTOM5:57.4 Scaled Tags Per Million
Pig:46.5 nTPM
Mouse:73.2 nTPM
Allen mouse:0.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA042215
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 54.9
Sample id Sample description nTPM
Hippocampus
nTPM: 54.9
2621 Female, age 67, right hemisphere 59.1
1898 Male, age 80, left hemisphere 58.0
1855 Male, age 76, left hemisphere 56.5
2148 Female, age 91, left hemisphere 55.1
2529 Female, age 94, left hemisphere 53.8
1911 Female, age 85, right hemisphere 47.1
Dentate gyrus
nTPM: 50.5
2010 Male, age 76, both hemispheres 61.3
2530 Female, age 94, left hemisphere 60.8
2528 Male, age 74, both hemispheres 48.4
1927 Female, age 91, both hemispheres 47.8
2531 Female, age 67, both hemispheres 44.2
2246 Female, age 85, both hemispheres 40.6
Entorhinal gyrus
nTPM: 49.7
2764 Male, age 80, right hemisphere 56.0
2117 Female, age 91, right hemisphere 55.5
1938 Female, age 85, left hemisphere 51.6
1787 Male, age 76, left hemisphere 48.4
2613 Female, age 94, left hemisphere 47.8
2686 Male, age 75, right hemisphere 38.8
Hippocampus, CA1
nTPM: 43.8
2749 Male, age 80, left hemisphere 51.2
2045 Male, age 76, both hemispheres 49.2
1873 Female, age 85, both hemispheres 48.9
2527 Male, age 74, both hemispheres 47.6
2082 Female, age 91, right hemisphere 22.1
Hippocampus, CA2
nTPM: 50.4
1940 Female, age 85, left hemisphere 61.2
1963 Male, age 80, left hemisphere 55.1
2249 Male, age 74, both hemispheres 55.0
2437 Female, age 94, left hemisphere 50.8
1892 Male, age 76, both hemispheres 47.5
2113 Female, age 91, right hemisphere 32.7
Hippocampus, CA3
nTPM: 49.8
1867 Male, age 76, both hemispheres 60.9
2861 Female, age 67, both hemispheres 58.3
2436 Male, age 74, both hemispheres 51.4
2620 Female, age 94, left hemisphere 50.1
1891 Female, age 85, both hemispheres 45.5
2137 Male, age 80, left hemisphere 32.4
Parahippocampal cortex
nTPM: 46.1
2018 Male, age 76, both hemispheres 64.8
2250 Female, age 67, right hemisphere 48.9
1990 Female, age 91, right hemisphere 47.7
2245 Female, age 91, both hemispheres 47.4
2622 Female, age 67, right hemisphere 46.2
1933 Female, age 85, both hemispheres 45.4
2692 Male, age 74, both hemispheres 42.0
2693 Female, age 94, both hemispheres 39.8
1850 Male, age 80, both hemispheres 39.3
2532 Female, age 72, left hemisphere 39.3
Perirhinal gyrus
nTPM: 40.2
2521 Female, age 94, right hemisphere 45.7
1794 Male, age 80, right hemisphere 43.0
1847 Female, age 91, left hemisphere 41.7
2848 Male, age 76, right hemisphere 36.0
1841 Female, age 85, right hemisphere 34.7
Subiculum
nTPM: 54.6
2729 Female, age 91, right hemisphere 63.0
2619 Male, age 74, both hemispheres 60.0
2042 Male, age 76, both hemispheres 55.0
1901 Male, age 80, both hemispheres 54.5
1977 Female, age 85, both hemispheres 54.0
2438 Female, age 94, left hemisphere 41.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 48.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 48.9
Samples: 197

Max nTPM: 109.7
Min nTPM: 24.9
Std nTPM: 12.6
Median nTPM: 47.7
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 109.7
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 100.8
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 86.2
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 81.2
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 77.4
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 77.2
GTEX-1B933-0011-R1b-SM-9QEGW 50-59 years, female 77.0
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 71.1
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 71.1
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 70.7
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 68.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 57.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 57.4
FF:10153-102I9 76 years, female 70.2
FF:10169-103B7 60 years, female 44.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 46.5
Pig sample Sample description nTPM
Subiculum
nTPM: 44.7
Samples: 4

Max nTPM: 58.8
Min nTPM: 36.0
Sample A Female 58.8
Sample B Female 41.2
Sample C Male 36.0
Sample D Male 42.8
Dorsal hippocampus
nTPM: 46.5
Samples: 4

Max nTPM: 60.8
Min nTPM: 34.2
Sample A Female 60.8
Sample B Female 43.8
Sample C Male 47.3
Sample D Male 34.2
Entorhinal cortex
nTPM: 42.5
Samples: 4

Max nTPM: 51.7
Min nTPM: 32.2
Sample A Female 41.3
Sample B Female 44.7
Sample C Male 51.7
Sample D Male 32.2
Ventral hippocampus
nTPM: 42.5
Samples: 4

Max nTPM: 50.3
Min nTPM: 36.1
Sample A Female 40.2
Sample B Female 36.1
Sample C Male 50.3
Sample D Male 43.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 73.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 72.2
Samples: 4

Max nTPM: 76.3
Min nTPM: 63.5
Sample A Male 72.9
Sample B Male 76.0
Sample C Female 76.3
Sample D Female 63.5
Hippocampal formation
nTPM: 73.2
Samples: 4

Max nTPM: 78.2
Min nTPM: 65.7
Sample A Male 78.2
Sample B Male 65.7
Sample C Female 77.8
Sample D Female 71.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.7
70528396 Antisense, RP_050623_02_E04, Mouse strain C57BL/6J (56 days, male) 0.7

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