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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
79.1
nTPM
Monaco:
235.6
nTPM
Schmiedel:
107.2
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
79.1
HPA sample
nTPM
gdT-cell nTPM: 26.2
Samples: 6
Max nTPM: 33.4
Min nTPM: 19.4
P10809_1007
19.4
P10809_1022
24.0
P10809_1041
33.4
P10809_1060
32.4
P10809_1077
22.8
P10809_1098
25.3
MAIT T-cell nTPM: 35.4
Samples: 6
Max nTPM: 45.1
Min nTPM: 22.8
P10809_1006
23.8
P10809_1024
32.5
P10809_1043
45.1
P10809_1062
43.3
P10809_1083
22.8
P10809_1097
44.6
Memory CD4 T-cell nTPM: 79.1
Samples: 6
Max nTPM: 115.7
Min nTPM: 51.3
P10809_1014
52.3
P10809_1026
51.3
P10809_1045
107.7
P10809_1064
91.3
P10809_1086
56.0
P10809_1113
115.7
Memory CD8 T-cell nTPM: 31.4
Samples: 5
Max nTPM: 40.4
Min nTPM: 23.1
P10809_1012
26.6
P10809_1027
23.1
P10809_1046
40.4
P10809_1065
29.8
P10809_1111
37.2
Naive CD4 T-cell nTPM: 48.3
Samples: 6
Max nTPM: 64.0
Min nTPM: 32.4
P10809_1015
32.4
P10809_1030
35.8
P10809_1049
56.0
P10809_1068
53.9
P10809_1085
47.6
P10809_1112
64.0
Naive CD8 T-cell nTPM: 21.3
Samples: 6
Max nTPM: 30.3
Min nTPM: 13.7
P10809_1016
19.1
P10809_1031
13.7
P10809_1050
22.4
P10809_1069
30.3
P10809_1087
19.9
P10809_1110
22.4
T-reg nTPM: 78.8
Samples: 6
Max nTPM: 104.7
Min nTPM: 63.7
P10809_1018
63.7
P10809_1037
64.4
P10809_1056
81.5
P10809_1075
78.0
P10809_1094
80.5
P10809_1106
104.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
235.6
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 84.1
Samples: 4
Max nTPM: 100.6
Min nTPM: 58.3
RHH5202_R3573
100.6
RHH5230_R3602
78.1
RHH5259_R3631
58.3
RHH5288_R3660
99.2
Effector memory CD8 T-cell nTPM: 85.1
Samples: 4
Max nTPM: 98.5
Min nTPM: 65.7
RHH5203_R3574
94.0
RHH5231_R3603
65.7
RHH5260_R3632
82.2
RHH5289_R3661
98.5
MAIT T-cell nTPM: 79.1
Samples: 4
Max nTPM: 94.4
Min nTPM: 60.5
RHH5233_R3605
60.5
RHH5205_R3576
94.4
RHH5262_R3634
78.6
RHH5297_R3663
82.8
Memory CD4 T-cell TFH nTPM: 232.1
Samples: 4
Max nTPM: 269.1
Min nTPM: 185.5
RHH5300_R3666
260.5
RHH5236_R3608
269.1
RHH5265_R3637
185.5
RHH5208_R3579
213.2
Memory CD4 T-cell Th1 nTPM: 166.5
Samples: 4
Max nTPM: 184.9
Min nTPM: 140.3
RHH5210_R3581
170.8
RHH5302_R3668
184.9
RHH5238_R3610
140.3
RHH5267_R3639
169.8
Memory CD4 T-cell Th1/Th17 nTPM: 217.3
Samples: 4
Max nTPM: 269.2
Min nTPM: 169.9
RHH5303_R3669
269.2
RHH5211_R3582
235.4
RHH5239_R3611
169.9
RHH5268_R3640
194.7
Memory CD4 T-cell Th17 nTPM: 235.6
Samples: 4
Max nTPM: 300.7
Min nTPM: 155.0
RHH5304_R3670
244.4
RHH5212_R3583
242.4
RHH5240_R3612
300.7
RHH5269_R3641
155.0
Memory CD4 T-cell Th2 nTPM: 202.6
Samples: 4
Max nTPM: 255.6
Min nTPM: 147.2
RHH5305_R3671
255.6
RHH5213_R3584
200.2
RHH5241_R3613
207.4
RHH5270_R3642
147.2
Naive CD4 T-cell nTPM: 111.1
Samples: 4
Max nTPM: 124.4
Min nTPM: 95.7
RHH5306_R3672
111.8
RHH5214_R3585
124.4
RHH5242_R3614
112.5
RHH5271_R3643
95.7
Naive CD8 T-cell nTPM: 47.2
Samples: 4
Max nTPM: 67.4
Min nTPM: 33.5
RHH5201_R3572
48.8
RHH5229_R3601
39.2
RHH5258_R3630
33.5
RHH5287_R3659
67.4
Non-Vd2 gdTCR nTPM: 60.2
Samples: 4
Max nTPM: 72.7
Min nTPM: 53.6
RHH5235_R3607
72.7
RHH5264_R3636
53.6
RHH5207_R3578
59.5
RHH5299_R3665
54.9
T-reg nTPM: 141.8
Samples: 4
Max nTPM: 180.6
Min nTPM: 95.9
RHH5301_R3667
156.7
RHH5237_R3609
180.6
RHH5266_R3638
133.8
RHH5209_R3580
95.9
Terminal effector memory CD4 T-cell nTPM: 170.2
Samples: 2
Max nTPM: 214.1
Min nTPM: 126.2
RHH5243_R3615
126.2
RHH5272_R3644
214.1
Terminal effector memory CD8 T-cell nTPM: 66.2
Samples: 4
Max nTPM: 87.9
Min nTPM: 48.8
RHH5232_R3604
87.9
RHH5204_R3575
48.8
RHH5261_R3633
55.9
RHH5296_R3662
72.3
Vd2 gdTCR nTPM: 78.6
Samples: 4
Max nTPM: 89.0
Min nTPM: 64.3
RHH5234_R3606
78.6
RHH5206_R3577
89.0
RHH5263_R3635
82.5
RHH5298_R3664
64.3
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
