We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
57.4
nTPM
Monaco:
113.7
nTPM
Schmiedel:
33.9
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
57.4
HPA sample
nTPM
gdT-cell nTPM: 57.4
Samples: 6
Max nTPM: 71.3
Min nTPM: 47.1
P10809_1007
53.2
P10809_1022
71.3
P10809_1041
62.5
P10809_1060
48.5
P10809_1077
47.1
P10809_1098
61.7
MAIT T-cell nTPM: 51.3
Samples: 6
Max nTPM: 64.0
Min nTPM: 39.4
P10809_1006
51.8
P10809_1024
64.0
P10809_1043
52.5
P10809_1062
56.5
P10809_1083
39.4
P10809_1097
43.6
Memory CD4 T-cell nTPM: 39.7
Samples: 6
Max nTPM: 49.7
Min nTPM: 31.8
P10809_1014
36.5
P10809_1026
31.8
P10809_1045
49.7
P10809_1064
42.5
P10809_1086
39.1
P10809_1113
38.6
Memory CD8 T-cell nTPM: 46.5
Samples: 5
Max nTPM: 54.0
Min nTPM: 37.4
P10809_1012
37.4
P10809_1027
47.2
P10809_1046
54.0
P10809_1065
44.3
P10809_1111
49.6
Naive CD4 T-cell nTPM: 51.8
Samples: 6
Max nTPM: 60.7
Min nTPM: 45.1
P10809_1015
45.1
P10809_1030
56.7
P10809_1049
60.7
P10809_1068
49.3
P10809_1085
46.6
P10809_1112
52.3
Naive CD8 T-cell nTPM: 49.5
Samples: 6
Max nTPM: 62.2
Min nTPM: 42.5
P10809_1016
42.5
P10809_1031
44.7
P10809_1050
62.2
P10809_1069
47.7
P10809_1087
48.9
P10809_1110
51.1
T-reg nTPM: 48.8
Samples: 6
Max nTPM: 61.9
Min nTPM: 31.5
P10809_1018
51.9
P10809_1037
37.4
P10809_1056
31.5
P10809_1075
61.9
P10809_1094
56.4
P10809_1106
53.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
113.7
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 79.9
Samples: 4
Max nTPM: 98.9
Min nTPM: 60.6
RHH5202_R3573
98.9
RHH5230_R3602
89.4
RHH5259_R3631
60.6
RHH5288_R3660
70.5
Effector memory CD8 T-cell nTPM: 93.0
Samples: 4
Max nTPM: 139.1
Min nTPM: 67.0
RHH5203_R3574
139.1
RHH5231_R3603
72.9
RHH5260_R3632
67.0
RHH5289_R3661
92.9
MAIT T-cell nTPM: 91.9
Samples: 4
Max nTPM: 109.1
Min nTPM: 69.7
RHH5233_R3605
109.1
RHH5205_R3576
69.7
RHH5262_R3634
91.8
RHH5297_R3663
97.0
Memory CD4 T-cell TFH nTPM: 78.8
Samples: 4
Max nTPM: 95.6
Min nTPM: 69.4
RHH5300_R3666
75.9
RHH5236_R3608
95.6
RHH5265_R3637
69.4
RHH5208_R3579
74.4
Memory CD4 T-cell Th1 nTPM: 77.1
Samples: 4
Max nTPM: 104.3
Min nTPM: 47.6
RHH5210_R3581
104.3
RHH5302_R3668
87.2
RHH5238_R3610
47.6
RHH5267_R3639
69.4
Memory CD4 T-cell Th1/Th17 nTPM: 76.3
Samples: 4
Max nTPM: 102.0
Min nTPM: 52.8
RHH5303_R3669
102.0
RHH5211_R3582
78.0
RHH5239_R3611
72.4
RHH5268_R3640
52.8
Memory CD4 T-cell Th17 nTPM: 61.0
Samples: 4
Max nTPM: 78.1
Min nTPM: 45.6
RHH5304_R3670
78.1
RHH5212_R3583
61.1
RHH5240_R3612
45.6
RHH5269_R3641
59.2
Memory CD4 T-cell Th2 nTPM: 67.2
Samples: 4
Max nTPM: 74.0
Min nTPM: 62.1
RHH5305_R3671
62.8
RHH5213_R3584
74.0
RHH5241_R3613
69.9
RHH5270_R3642
62.1
Naive CD4 T-cell nTPM: 83.8
Samples: 4
Max nTPM: 111.0
Min nTPM: 67.7
RHH5306_R3672
78.1
RHH5214_R3585
67.7
RHH5242_R3614
111.0
RHH5271_R3643
78.5
Naive CD8 T-cell nTPM: 96.9
Samples: 4
Max nTPM: 122.3
Min nTPM: 65.0
RHH5201_R3572
122.3
RHH5229_R3601
65.0
RHH5258_R3630
91.2
RHH5287_R3659
109.1
Non-Vd2 gdTCR nTPM: 103.6
Samples: 4
Max nTPM: 124.9
Min nTPM: 87.1
RHH5235_R3607
87.1
RHH5264_R3636
104.2
RHH5207_R3578
124.9
RHH5299_R3665
98.0
T-reg nTPM: 94.5
Samples: 4
Max nTPM: 118.1
Min nTPM: 80.0
RHH5301_R3667
80.0
RHH5237_R3609
118.1
RHH5266_R3638
81.7
RHH5209_R3580
98.3
Terminal effector memory CD4 T-cell nTPM: 86.3
Samples: 2
Max nTPM: 90.5
Min nTPM: 82.1
RHH5243_R3615
90.5
RHH5272_R3644
82.1
Terminal effector memory CD8 T-cell nTPM: 101.9
Samples: 4
Max nTPM: 122.5
Min nTPM: 80.8
RHH5232_R3604
122.5
RHH5204_R3575
106.2
RHH5261_R3633
80.8
RHH5296_R3662
98.2
Vd2 gdTCR nTPM: 113.7
Samples: 4
Max nTPM: 130.7
Min nTPM: 84.1
RHH5234_R3606
118.3
RHH5206_R3577
130.7
RHH5263_R3635
121.5
RHH5298_R3664
84.1
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
