HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: Medium
RNA expressioni
Consensus:62.2 nTPM
HPA Brain:68.8 nTPM
GTEx:62.2 nTPM
FANTOM5:192.6 Scaled Tags Per Million
Pig:138.8 nTPM
Mouse:83.2 nTPM
Allen mouse:21.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA020044Antibody CAB022065
Glial cells HighHigh
Neuronal cells MediumMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 68.8
Sample id Sample description nTPM
Hippocampus
nTPM: 68.1
1898 Male, age 80, left hemisphere 80.3
2529 Female, age 94, left hemisphere 73.9
1911 Female, age 85, right hemisphere 67.9
1855 Male, age 76, left hemisphere 66.4
2621 Female, age 67, right hemisphere 62.3
2148 Female, age 91, left hemisphere 57.9
Dentate gyrus
nTPM: 61.6
2010 Male, age 76, both hemispheres 73.4
2530 Female, age 94, left hemisphere 69.5
2528 Male, age 74, both hemispheres 62.3
2246 Female, age 85, both hemispheres 60.5
1927 Female, age 91, both hemispheres 56.2
2531 Female, age 67, both hemispheres 47.6
Entorhinal gyrus
nTPM: 64.7
2117 Female, age 91, right hemisphere 75.4
1938 Female, age 85, left hemisphere 71.5
2764 Male, age 80, right hemisphere 65.5
1787 Male, age 76, left hemisphere 64.4
2686 Male, age 75, right hemisphere 60.8
2613 Female, age 94, left hemisphere 50.3
Hippocampus, CA1
nTPM: 66.4
1873 Female, age 85, both hemispheres 72.5
2749 Male, age 80, left hemisphere 71.2
2527 Male, age 74, both hemispheres 70.0
2045 Male, age 76, both hemispheres 61.8
2082 Female, age 91, right hemisphere 56.6
Hippocampus, CA2
nTPM: 65.4
2249 Male, age 74, both hemispheres 74.7
1963 Male, age 80, left hemisphere 69.9
1892 Male, age 76, both hemispheres 67.3
2113 Female, age 91, right hemisphere 61.4
1940 Female, age 85, left hemisphere 60.6
2437 Female, age 94, left hemisphere 58.6
Hippocampus, CA3
nTPM: 56.2
1891 Female, age 85, both hemispheres 71.4
1867 Male, age 76, both hemispheres 68.1
2436 Male, age 74, both hemispheres 59.3
2137 Male, age 80, left hemisphere 58.6
2861 Female, age 67, both hemispheres 42.0
2620 Female, age 94, left hemisphere 38.0
Parahippocampal cortex
nTPM: 63.0
1850 Male, age 80, both hemispheres 75.4
1933 Female, age 85, both hemispheres 71.4
2018 Male, age 76, both hemispheres 69.1
1990 Female, age 91, right hemisphere 68.7
2245 Female, age 91, both hemispheres 65.0
2250 Female, age 67, right hemisphere 63.8
2532 Female, age 72, left hemisphere 61.7
2692 Male, age 74, both hemispheres 61.6
2693 Female, age 94, both hemispheres 47.8
2622 Female, age 67, right hemisphere 45.8
Perirhinal gyrus
nTPM: 67.4
1841 Female, age 85, right hemisphere 73.5
1794 Male, age 80, right hemisphere 71.2
2848 Male, age 76, right hemisphere 67.2
1847 Female, age 91, left hemisphere 66.7
2521 Female, age 94, right hemisphere 58.7
Subiculum
nTPM: 68.8
1977 Female, age 85, both hemispheres 76.4
1901 Male, age 80, both hemispheres 72.8
2042 Male, age 76, both hemispheres 72.4
2438 Female, age 94, left hemisphere 70.8
2619 Male, age 74, both hemispheres 60.4
2729 Female, age 91, right hemisphere 60.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 62.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 62.2
Samples: 197

Max nTPM: 125.9
Min nTPM: 36.8
Std nTPM: 15.8
Median nTPM: 58.5
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 125.9
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 113.6
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 111.4
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 109.0
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 105.6
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 104.4
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 104.1
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 102.9
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 102.7
GTEX-ZAB4-0011-R1a-SM-4RGNO 40-49 years, male 101.4
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 99.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 192.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 192.6
FF:10153-102I9 76 years, female 233.6
FF:10169-103B7 60 years, female 151.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 138.8
Pig sample Sample description nTPM
Subiculum
nTPM: 138.8
Samples: 4

Max nTPM: 181.7
Min nTPM: 109.6
Sample A Female 181.7
Sample B Female 136.5
Sample C Male 127.4
Sample D Male 109.6
Dorsal hippocampus
nTPM: 98.6
Samples: 4

Max nTPM: 117.6
Min nTPM: 70.5
Sample A Female 117.6
Sample B Female 90.2
Sample C Male 116.0
Sample D Male 70.5
Entorhinal cortex
nTPM: 107.8
Samples: 4

Max nTPM: 117.5
Min nTPM: 97.7
Sample A Female 103.4
Sample B Female 117.5
Sample C Male 112.5
Sample D Male 97.7
Ventral hippocampus
nTPM: 102.1
Samples: 4

Max nTPM: 110.0
Min nTPM: 93.9
Sample A Female 107.5
Sample B Female 96.9
Sample C Male 110.0
Sample D Male 93.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 83.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 83.2
Samples: 4

Max nTPM: 86.0
Min nTPM: 80.9
Sample A Male 86.0
Sample B Male 83.5
Sample C Female 82.2
Sample D Female 80.9
Hippocampal formation
nTPM: 71.8
Samples: 4

Max nTPM: 78.3
Min nTPM: 68.2
Sample A Male 78.3
Sample B Male 68.2
Sample C Female 69.8
Sample D Female 70.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 21.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 21.0
69817898 Antisense, RP_050510_03_H12, Mouse strain C57BL/6J (56 days, male) 21.0

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