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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
320.8
nTPM
Monaco:
111.7
nTPM
Schmiedel:
112.8
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
320.8
HPA sample
nTPM
gdT-cell nTPM: 178.5
Samples: 6
Max nTPM: 263.1
Min nTPM: 100.0
P10809_1007
202.7
P10809_1022
100.0
P10809_1041
104.6
P10809_1060
171.8
P10809_1077
263.1
P10809_1098
228.5
MAIT T-cell nTPM: 189.7
Samples: 6
Max nTPM: 277.0
Min nTPM: 100.7
P10809_1006
196.4
P10809_1024
100.7
P10809_1043
107.8
P10809_1062
211.7
P10809_1083
244.5
P10809_1097
277.0
Memory CD4 T-cell nTPM: 271.8
Samples: 6
Max nTPM: 368.8
Min nTPM: 109.7
P10809_1014
329.0
P10809_1026
160.6
P10809_1045
109.7
P10809_1064
310.8
P10809_1086
368.8
P10809_1113
351.9
Memory CD8 T-cell nTPM: 193.5
Samples: 5
Max nTPM: 272.6
Min nTPM: 105.8
P10809_1012
210.4
P10809_1027
116.0
P10809_1046
105.8
P10809_1065
272.6
P10809_1111
262.6
Naive CD4 T-cell nTPM: 320.8
Samples: 6
Max nTPM: 446.0
Min nTPM: 170.2
P10809_1015
446.0
P10809_1030
194.2
P10809_1049
170.2
P10809_1068
389.8
P10809_1085
336.9
P10809_1112
387.5
Naive CD8 T-cell nTPM: 295.9
Samples: 6
Max nTPM: 448.6
Min nTPM: 129.9
P10809_1016
448.6
P10809_1031
188.5
P10809_1050
129.9
P10809_1069
311.4
P10809_1087
359.8
P10809_1110
337.2
T-reg nTPM: 273.8
Samples: 6
Max nTPM: 385.4
Min nTPM: 104.0
P10809_1018
376.7
P10809_1037
166.1
P10809_1056
104.0
P10809_1075
319.3
P10809_1094
291.0
P10809_1106
385.4
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
111.7
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 90.3
Samples: 4
Max nTPM: 105.2
Min nTPM: 79.4
RHH5202_R3573
79.4
RHH5230_R3602
105.2
RHH5259_R3631
96.0
RHH5288_R3660
80.5
Effector memory CD8 T-cell nTPM: 52.3
Samples: 4
Max nTPM: 67.9
Min nTPM: 25.7
RHH5203_R3574
25.7
RHH5231_R3603
63.1
RHH5260_R3632
67.9
RHH5289_R3661
52.4
MAIT T-cell nTPM: 63.9
Samples: 4
Max nTPM: 100.8
Min nTPM: 33.5
RHH5233_R3605
46.4
RHH5205_R3576
100.8
RHH5262_R3634
74.9
RHH5297_R3663
33.5
Memory CD4 T-cell TFH nTPM: 64.4
Samples: 4
Max nTPM: 79.6
Min nTPM: 42.3
RHH5300_R3666
73.9
RHH5236_R3608
79.6
RHH5265_R3637
61.8
RHH5208_R3579
42.3
Memory CD4 T-cell Th1 nTPM: 111.7
Samples: 4
Max nTPM: 144.3
Min nTPM: 57.4
RHH5210_R3581
57.4
RHH5302_R3668
110.9
RHH5238_R3610
134.3
RHH5267_R3639
144.3
Memory CD4 T-cell Th1/Th17 nTPM: 74.8
Samples: 4
Max nTPM: 94.1
Min nTPM: 63.7
RHH5303_R3669
63.7
RHH5211_R3582
74.9
RHH5239_R3611
66.3
RHH5268_R3640
94.1
Memory CD4 T-cell Th17 nTPM: 69.7
Samples: 4
Max nTPM: 83.6
Min nTPM: 48.1
RHH5304_R3670
81.2
RHH5212_R3583
65.7
RHH5240_R3612
83.6
RHH5269_R3641
48.1
Memory CD4 T-cell Th2 nTPM: 76.9
Samples: 4
Max nTPM: 116.2
Min nTPM: 59.5
RHH5305_R3671
116.2
RHH5213_R3584
65.2
RHH5241_R3613
59.5
RHH5270_R3642
66.6
Naive CD4 T-cell nTPM: 87.0
Samples: 4
Max nTPM: 123.1
Min nTPM: 66.4
RHH5306_R3672
123.1
RHH5214_R3585
79.5
RHH5242_R3614
66.4
RHH5271_R3643
79.0
Naive CD8 T-cell nTPM: 99.3
Samples: 4
Max nTPM: 141.7
Min nTPM: 54.1
RHH5201_R3572
78.6
RHH5229_R3601
141.7
RHH5258_R3630
54.1
RHH5287_R3659
122.6
Non-Vd2 gdTCR nTPM: 80.5
Samples: 4
Max nTPM: 104.5
Min nTPM: 48.1
RHH5235_R3607
104.5
RHH5264_R3636
76.7
RHH5207_R3578
48.1
RHH5299_R3665
92.7
T-reg nTPM: 65.8
Samples: 4
Max nTPM: 100.2
Min nTPM: 28.6
RHH5301_R3667
63.4
RHH5237_R3609
28.6
RHH5266_R3638
70.9
RHH5209_R3580
100.2
Terminal effector memory CD4 T-cell nTPM: 63.4
Samples: 2
Max nTPM: 74.2
Min nTPM: 52.6
RHH5243_R3615
74.2
RHH5272_R3644
52.6
Terminal effector memory CD8 T-cell nTPM: 101.8
Samples: 4
Max nTPM: 133.6
Min nTPM: 49.2
RHH5232_R3604
49.2
RHH5204_R3575
123.6
RHH5261_R3633
133.6
RHH5296_R3662
100.7
Vd2 gdTCR nTPM: 106.7
Samples: 4
Max nTPM: 169.9
Min nTPM: 57.1
RHH5234_R3606
96.9
RHH5206_R3577
169.9
RHH5263_R3635
102.9
RHH5298_R3664
57.1
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
